Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX8Q9HC52 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CBX8Q9HC52 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CBX8Q9HC52 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.52■□□□□ 0.4
CBX8Q9HC52 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CBX8Q9HC52 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CBX8Q9HC52 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CBX8Q9HC52 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CBX8Q9HC52 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CBX8Q9HC52 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CBX8Q9HC52 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CBX8Q9HC52 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.52■□□□□ 0.4
CBX8Q9HC52 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.52■□□□□ 0.4
CBX8Q9HC52 INTS4P1-203ENST00000641008 3683 ntBASIC17.52■□□□□ 0.4
CBX8Q9HC52 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CBX8Q9HC52 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CBX8Q9HC52 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CBX8Q9HC52 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CBX8Q9HC52 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.52■□□□□ 0.4
CBX8Q9HC52 AC079781.3-201ENST00000449110 356 ntBASIC17.52■□□□□ 0.4
CBX8Q9HC52 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.52■□□□□ 0.4
CBX8Q9HC52 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.52■□□□□ 0.4
CBX8Q9HC52 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CBX8Q9HC52 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.52■□□□□ 0.4
CBX8Q9HC52 AC099522.2-201ENST00000607001 744 ntBASIC17.52■□□□□ 0.4
CBX8Q9HC52 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
CBX8Q9HC52 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.52■□□□□ 0.4
CBX8Q9HC52 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CBX8Q9HC52 REXO1L2P-201ENST00000425429 2069 ntBASIC17.52■□□□□ 0.39
CBX8Q9HC52 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CBX8Q9HC52 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CBX8Q9HC52 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.52■□□□□ 0.39
CBX8Q9HC52 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CBX8Q9HC52 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CBX8Q9HC52 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CBX8Q9HC52 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CBX8Q9HC52 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
CBX8Q9HC52 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.52■□□□□ 0.39
CBX8Q9HC52 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.52■□□□□ 0.39
CBX8Q9HC52 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CBX8Q9HC52 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CBX8Q9HC52 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CBX8Q9HC52 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.51■□□□□ 0.39
CBX8Q9HC52 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX8Q9HC52 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX8Q9HC52 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX8Q9HC52 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX8Q9HC52 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CBX8Q9HC52 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.51■□□□□ 0.39
CBX8Q9HC52 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC17.51■□□□□ 0.39
CBX8Q9HC52 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX8Q9HC52 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CBX8Q9HC52 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX8Q9HC52 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX8Q9HC52 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CBX8Q9HC52 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.51■□□□□ 0.39
CBX8Q9HC52 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX8Q9HC52 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX8Q9HC52 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CBX8Q9HC52 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.51■□□□□ 0.39
CBX8Q9HC52 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CBX8Q9HC52 AL031284.1-201ENST00000419297 478 ntBASIC17.51■□□□□ 0.39
CBX8Q9HC52 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CBX8Q9HC52 IGHV3-22-201ENST00000520721 359 ntBASIC17.51■□□□□ 0.39
CBX8Q9HC52 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CBX8Q9HC52 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.51■□□□□ 0.39
CBX8Q9HC52 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
CBX8Q9HC52 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CBX8Q9HC52 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX8Q9HC52 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CBX8Q9HC52 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.51■□□□□ 0.39
CBX8Q9HC52 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.51■□□□□ 0.39
CBX8Q9HC52 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX8Q9HC52 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX8Q9HC52 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CBX8Q9HC52 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX8Q9HC52 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
CBX8Q9HC52 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CBX8Q9HC52 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX8Q9HC52 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CBX8Q9HC52 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX8Q9HC52 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
CBX8Q9HC52 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX8Q9HC52 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CBX8Q9HC52 AC027601.5-201ENST00000624065 2482 ntBASIC17.5■□□□□ 0.39
CBX8Q9HC52 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
CBX8Q9HC52 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX8Q9HC52 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
CBX8Q9HC52 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX8Q9HC52 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC17.5■□□□□ 0.39
CBX8Q9HC52 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX8Q9HC52 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX8Q9HC52 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CBX8Q9HC52 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CBX8Q9HC52 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX8Q9HC52 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.5■□□□□ 0.39
CBX8Q9HC52 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CBX8Q9HC52 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CBX8Q9HC52 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CBX8Q9HC52 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms