Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 RNU1-129P-201ENST00000384064 167 ntBASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 AC136632.2-201ENST00000512891 861 ntBASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 U1.21-201ENST00000580816 167 ntBASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 MIR4515-201ENST00000584082 81 ntBASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 AC008667.4-201ENST00000607370 168 ntBASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 AC091076.1-201ENST00000610741 619 ntBASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 AL358472.4-201ENST00000633140 710 ntBASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 AC107918.4-202ENST00000641623 219 ntBASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 PMS2P4-201ENST00000412466 1052 ntBASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 DUSP5P1-201ENST00000441325 1139 ntBASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 AC245100.5-201ENST00000452108 331 ntBASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 AC021087.4-201ENST00000563761 564 ntBASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 AL031055.1-201ENST00000606362 631 ntBASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 AL365330.1-201ENST00000607459 531 ntBASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 AL121772.3-201ENST00000610840 674 ntBASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC10.56□□□□□ -0.72
SND1-IT1Q9HBX3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms