Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 AC093433.1-201ENST00000458048 571 ntBASIC18.21■□□□□ 0.51
SH2D4AQ9H788 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.21■□□□□ 0.5
SH2D4AQ9H788 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.21■□□□□ 0.5
SH2D4AQ9H788 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D4AQ9H788 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 RPL7P3-201ENST00000441388 714 ntBASIC18.19■□□□□ 0.5
SH2D4AQ9H788 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 AC022137.2-201ENST00000503482 481 ntBASIC18.19■□□□□ 0.5
SH2D4AQ9H788 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 MIR6799-201ENST00000620297 69 ntBASIC18.19■□□□□ 0.5
SH2D4AQ9H788 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms