Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 RNF126P1-202ENST00000569893 925 ntBASIC12.77□□□□□ -0.37
NKX6-2Q9C056 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 AL592071.1-201ENST00000611956 408 ntBASIC12.77□□□□□ -0.37
NKX6-2Q9C056 AC011558.1-201ENST00000623459 338 ntBASIC12.77□□□□□ -0.37
NKX6-2Q9C056 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 AC097359.2-201ENST00000604992 2389 ntBASIC12.76□□□□□ -0.37
NKX6-2Q9C056 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.76□□□□□ -0.37
NKX6-2Q9C056 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 AC152010.1-201ENST00000415779 2006 ntBASIC12.76□□□□□ -0.37
NKX6-2Q9C056 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NKX6-2Q9C056 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX6-2Q9C056 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
NKX6-2Q9C056 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
NKX6-2Q9C056 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.75□□□□□ -0.37
NKX6-2Q9C056 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX6-2Q9C056 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX6-2Q9C056 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NKX6-2Q9C056 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX6-2Q9C056 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NKX6-2Q9C056 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX6-2Q9C056 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX6-2Q9C056 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX6-2Q9C056 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NKX6-2Q9C056 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NKX6-2Q9C056 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.75□□□□□ -0.37
NKX6-2Q9C056 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.75□□□□□ -0.37
NKX6-2Q9C056 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NKX6-2Q9C056 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.75□□□□□ -0.37
NKX6-2Q9C056 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NKX6-2Q9C056 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms