Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC3Q9BY71 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 AC022188.1-201ENST00000620960 1664 ntBASIC16.28■□□□□ 0.2
LRRC3Q9BY71 TUBB1P2-201ENST00000422712 1306 ntBASIC16.28■□□□□ 0.2
LRRC3Q9BY71 TUBB1P1-201ENST00000503144 1300 ntBASIC16.28■□□□□ 0.2
LRRC3Q9BY71 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 KRT90P-201ENST00000549264 1064 ntBASIC16.28■□□□□ 0.2
LRRC3Q9BY71 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC3Q9BY71 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC3Q9BY71 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.27■□□□□ 0.2
LRRC3Q9BY71 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.27■□□□□ 0.2
LRRC3Q9BY71 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC3Q9BY71 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LRRC3Q9BY71 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC3Q9BY71 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC3Q9BY71 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.27■□□□□ 0.2
LRRC3Q9BY71 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC3Q9BY71 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC3Q9BY71 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC3Q9BY71 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC3Q9BY71 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.27■□□□□ 0.2
LRRC3Q9BY71 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
LRRC3Q9BY71 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
LRRC3Q9BY71 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LRRC3Q9BY71 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.27■□□□□ 0.2
LRRC3Q9BY71 AC026954.1-201ENST00000429771 1293 ntBASIC16.27■□□□□ 0.2
LRRC3Q9BY71 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC3Q9BY71 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.27■□□□□ 0.2
LRRC3Q9BY71 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
LRRC3Q9BY71 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC3Q9BY71 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRC3Q9BY71 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC3Q9BY71 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC3Q9BY71 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.27■□□□□ 0.19
LRRC3Q9BY71 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.27■□□□□ 0.19
LRRC3Q9BY71 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC3Q9BY71 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC3Q9BY71 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC3Q9BY71 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC3Q9BY71 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC3Q9BY71 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC3Q9BY71 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC3Q9BY71 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 CNN2P8-201ENST00000421872 913 ntBASIC16.26■□□□□ 0.19
LRRC3Q9BY71 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 AP001582.1-201ENST00000525856 295 ntBASIC16.26■□□□□ 0.19
LRRC3Q9BY71 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 MIR6869-201ENST00000619434 62 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms