Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 AC007292.2-201ENST00000593524 1812 ntBASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 AJ011931.1-201ENST00000618749 2492 ntBASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 AC139749.1-202ENST00000617529 3139 ntBASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 FAM220BP-201ENST00000377689 816 ntBASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 FAM58CP-201ENST00000435741 640 ntBASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 HNRNPUP1-201ENST00000554987 333 ntBASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 AC140113.2-201ENST00000604370 208 ntBASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 OR2I1P-210ENST00000642037 4691 ntBASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 FGD5P1-202ENST00000614866 2498 ntBASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HDHD3Q9BSH5 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HDHD3Q9BSH5 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HDHD3Q9BSH5 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HDHD3Q9BSH5 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HDHD3Q9BSH5 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HDHD3Q9BSH5 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.27□□□□□ -0.28
HDHD3Q9BSH5 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
HDHD3Q9BSH5 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.27□□□□□ -0.28
HDHD3Q9BSH5 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.27□□□□□ -0.28
HDHD3Q9BSH5 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HDHD3Q9BSH5 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HDHD3Q9BSH5 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
HDHD3Q9BSH5 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.28
HDHD3Q9BSH5 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HDHD3Q9BSH5 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
HDHD3Q9BSH5 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HDHD3Q9BSH5 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
HDHD3Q9BSH5 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 MED15P5-201ENST00000423150 992 ntBASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 AL645939.2-201ENST00000427340 991 ntBASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 AL139010.1-201ENST00000454878 894 ntBASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 AC243562.1-201ENST00000560672 389 ntBASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.27□□□□□ -0.29
HDHD3Q9BSH5 AP000842.3-202ENST00000569238 1080 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms