Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC11.96□□□□□ -0.49
VGLL1Q99990 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VGLL1Q99990 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
VGLL1Q99990 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
VGLL1Q99990 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
VGLL1Q99990 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC11.96□□□□□ -0.49
VGLL1Q99990 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
VGLL1Q99990 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC11.96□□□□□ -0.49
VGLL1Q99990 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
VGLL1Q99990 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VGLL1Q99990 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
VGLL1Q99990 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC11.96□□□□□ -0.49
VGLL1Q99990 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC11.96□□□□□ -0.49
VGLL1Q99990 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VGLL1Q99990 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VGLL1Q99990 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VGLL1Q99990 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VGLL1Q99990 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
VGLL1Q99990 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC11.96□□□□□ -0.49
VGLL1Q99990 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC11.96□□□□□ -0.49
VGLL1Q99990 SMN2-210ENST00000511812 867 ntTSL 2 BASIC11.96□□□□□ -0.49
VGLL1Q99990 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC11.96□□□□□ -0.49
VGLL1Q99990 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC11.96□□□□□ -0.49
VGLL1Q99990 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
VGLL1Q99990 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC11.96□□□□□ -0.49
VGLL1Q99990 AC061975.2-201ENST00000581722 295 ntBASIC11.96□□□□□ -0.49
VGLL1Q99990 AC024267.1-201ENST00000582320 895 ntBASIC11.96□□□□□ -0.49
VGLL1Q99990 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC11.96□□□□□ -0.49
VGLL1Q99990 SPTSSB-204ENST00000617024 1292 ntBASIC11.96□□□□□ -0.49
VGLL1Q99990 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VGLL1Q99990 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
VGLL1Q99990 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
VGLL1Q99990 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
VGLL1Q99990 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
VGLL1Q99990 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
VGLL1Q99990 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
VGLL1Q99990 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
VGLL1Q99990 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
VGLL1Q99990 AC026748.1-201ENST00000624349 3251 ntBASIC11.96□□□□□ -0.5
VGLL1Q99990 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
VGLL1Q99990 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
VGLL1Q99990 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
VGLL1Q99990 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
VGLL1Q99990 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
VGLL1Q99990 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
VGLL1Q99990 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
VGLL1Q99990 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC11.95□□□□□ -0.5
VGLL1Q99990 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC11.95□□□□□ -0.5
VGLL1Q99990 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VGLL1Q99990 AC104109.2-201ENST00000602919 1418 ntBASIC11.95□□□□□ -0.5
VGLL1Q99990 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.95□□□□□ -0.5
VGLL1Q99990 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VGLL1Q99990 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC11.95□□□□□ -0.5
VGLL1Q99990 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC11.95□□□□□ -0.5
VGLL1Q99990 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC11.95□□□□□ -0.5
VGLL1Q99990 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VGLL1Q99990 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC11.95□□□□□ -0.5
VGLL1Q99990 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC11.95□□□□□ -0.5
VGLL1Q99990 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VGLL1Q99990 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VGLL1Q99990 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC11.95□□□□□ -0.5
VGLL1Q99990 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VGLL1Q99990 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VGLL1Q99990 BSG-215ENST00000618006 1329 ntTSL 2 BASIC11.95□□□□□ -0.5
VGLL1Q99990 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
VGLL1Q99990 AGAP7P-201ENST00000582299 2062 ntBASIC11.95□□□□□ -0.5
VGLL1Q99990 AGAP14-201ENST00000624701 2060 ntBASIC11.95□□□□□ -0.5
VGLL1Q99990 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VGLL1Q99990 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
VGLL1Q99990 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VGLL1Q99990 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VGLL1Q99990 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VGLL1Q99990 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
VGLL1Q99990 AC002056.1-201ENST00000395613 760 ntBASIC11.95□□□□□ -0.5
VGLL1Q99990 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VGLL1Q99990 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC11.95□□□□□ -0.5
VGLL1Q99990 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC11.95□□□□□ -0.5
VGLL1Q99990 AC007967.2-201ENST00000432613 625 ntBASIC11.95□□□□□ -0.5
VGLL1Q99990 AC074386.1-202ENST00000463561 864 ntBASIC11.95□□□□□ -0.5
VGLL1Q99990 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
VGLL1Q99990 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC11.95□□□□□ -0.5
VGLL1Q99990 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC11.95□□□□□ -0.5
VGLL1Q99990 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC11.95□□□□□ -0.5
VGLL1Q99990 AP002472.1-201ENST00000577490 586 ntBASIC11.95□□□□□ -0.5
VGLL1Q99990 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC11.95□□□□□ -0.5
VGLL1Q99990 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC11.95□□□□□ -0.5
VGLL1Q99990 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC11.95□□□□□ -0.5
VGLL1Q99990 AC073389.1-201ENST00000595595 795 ntBASIC11.95□□□□□ -0.5
VGLL1Q99990 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC11.95□□□□□ -0.5
VGLL1Q99990 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC11.95□□□□□ -0.5
VGLL1Q99990 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
VGLL1Q99990 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC11.95□□□□□ -0.5
VGLL1Q99990 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC11.95□□□□□ -0.5
VGLL1Q99990 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VGLL1Q99990 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC11.95□□□□□ -0.5
VGLL1Q99990 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
VGLL1Q99990 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VGLL1Q99990 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VGLL1Q99990 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VGLL1Q99990 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms