Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.95□□□□□ -0.18
VRK1Q99986 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VRK1Q99986 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.95□□□□□ -0.18
VRK1Q99986 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.95□□□□□ -0.18
VRK1Q99986 PPT1-215ENST00000641471 2368 ntBASIC13.95□□□□□ -0.18
VRK1Q99986 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
VRK1Q99986 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VRK1Q99986 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.95□□□□□ -0.18
VRK1Q99986 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
VRK1Q99986 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
VRK1Q99986 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
VRK1Q99986 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
VRK1Q99986 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.95□□□□□ -0.18
VRK1Q99986 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VRK1Q99986 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
VRK1Q99986 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
VRK1Q99986 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.95□□□□□ -0.18
VRK1Q99986 TSPY16P-201ENST00000449843 468 ntBASIC13.95□□□□□ -0.18
VRK1Q99986 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.95□□□□□ -0.18
VRK1Q99986 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.95□□□□□ -0.18
VRK1Q99986 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.95□□□□□ -0.18
VRK1Q99986 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.95□□□□□ -0.18
VRK1Q99986 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.95□□□□□ -0.18
VRK1Q99986 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VRK1Q99986 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.95□□□□□ -0.18
VRK1Q99986 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VRK1Q99986 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
VRK1Q99986 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VRK1Q99986 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.95□□□□□ -0.18
VRK1Q99986 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VRK1Q99986 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
VRK1Q99986 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VRK1Q99986 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VRK1Q99986 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.95□□□□□ -0.18
VRK1Q99986 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VRK1Q99986 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
VRK1Q99986 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.94□□□□□ -0.18
VRK1Q99986 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.94□□□□□ -0.18
VRK1Q99986 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK1Q99986 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
VRK1Q99986 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
VRK1Q99986 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK1Q99986 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK1Q99986 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK1Q99986 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.94□□□□□ -0.18
VRK1Q99986 MYO15B-237ENST00000642007 4893 ntBASIC13.94□□□□□ -0.18
VRK1Q99986 GPAA1P2-202ENST00000606848 1787 ntBASIC13.94□□□□□ -0.18
VRK1Q99986 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.94□□□□□ -0.18
VRK1Q99986 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.94□□□□□ -0.18
VRK1Q99986 AC023157.3-201ENST00000619086 2088 ntBASIC13.94□□□□□ -0.18
VRK1Q99986 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.94□□□□□ -0.18
VRK1Q99986 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VRK1Q99986 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VRK1Q99986 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK1Q99986 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK1Q99986 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK1Q99986 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.94□□□□□ -0.18
VRK1Q99986 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.94□□□□□ -0.18
VRK1Q99986 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
VRK1Q99986 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.94□□□□□ -0.18
VRK1Q99986 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.94□□□□□ -0.18
VRK1Q99986 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.94□□□□□ -0.18
VRK1Q99986 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.94□□□□□ -0.18
VRK1Q99986 AC241585.1-201ENST00000433527 519 ntBASIC13.94□□□□□ -0.18
VRK1Q99986 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.94□□□□□ -0.18
VRK1Q99986 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.94□□□□□ -0.18
VRK1Q99986 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.94□□□□□ -0.18
VRK1Q99986 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.94□□□□□ -0.18
VRK1Q99986 AC138761.1-201ENST00000584393 385 ntBASIC13.94□□□□□ -0.18
VRK1Q99986 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.94□□□□□ -0.18
VRK1Q99986 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
VRK1Q99986 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK1Q99986 AC007967.4-201ENST00000614700 386 ntBASIC13.94□□□□□ -0.18
VRK1Q99986 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK1Q99986 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK1Q99986 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK1Q99986 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
VRK1Q99986 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.94□□□□□ -0.18
VRK1Q99986 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK1Q99986 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK1Q99986 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK1Q99986 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK1Q99986 FOXO1B-201ENST00000504678 1527 ntBASIC13.94□□□□□ -0.18
VRK1Q99986 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VRK1Q99986 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.94□□□□□ -0.18
VRK1Q99986 AL031731.1-201ENST00000642131 2094 ntBASIC13.94□□□□□ -0.18
VRK1Q99986 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
VRK1Q99986 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.94□□□□□ -0.18
VRK1Q99986 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VRK1Q99986 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
VRK1Q99986 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
VRK1Q99986 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK1Q99986 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
VRK1Q99986 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VRK1Q99986 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.93□□□□□ -0.18
VRK1Q99986 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VRK1Q99986 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK1Q99986 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.93□□□□□ -0.18
VRK1Q99986 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK1Q99986 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms