Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.65□□□□□ -0.06
TM9SF2Q99805 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.65□□□□□ -0.06
TM9SF2Q99805 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.65□□□□□ -0.06
TM9SF2Q99805 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.65□□□□□ -0.06
TM9SF2Q99805 AC003101.2-201ENST00000612557 442 ntBASIC14.65□□□□□ -0.06
TM9SF2Q99805 AC007967.4-201ENST00000614700 386 ntBASIC14.65□□□□□ -0.06
TM9SF2Q99805 AJ011932.1-201ENST00000621707 465 ntBASIC14.65□□□□□ -0.06
TM9SF2Q99805 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TM9SF2Q99805 LINC01144-201ENST00000626198 1710 ntBASIC14.65□□□□□ -0.06
TM9SF2Q99805 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TM9SF2Q99805 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF2Q99805 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.65□□□□□ -0.06
TM9SF2Q99805 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TM9SF2Q99805 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF2Q99805 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF2Q99805 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF2Q99805 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.65□□□□□ -0.06
TM9SF2Q99805 GPAA1P2-202ENST00000606848 1787 ntBASIC14.65□□□□□ -0.06
TM9SF2Q99805 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TM9SF2Q99805 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.65□□□□□ -0.06
TM9SF2Q99805 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.65□□□□□ -0.06
TM9SF2Q99805 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.65□□□□□ -0.06
TM9SF2Q99805 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.07
TM9SF2Q99805 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.65□□□□□ -0.07
TM9SF2Q99805 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF2Q99805 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF2Q99805 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.64□□□□□ -0.07
TM9SF2Q99805 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
TM9SF2Q99805 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF2Q99805 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF2Q99805 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF2Q99805 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF2Q99805 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.64□□□□□ -0.07
TM9SF2Q99805 AL035456.1-201ENST00000456064 1369 ntBASIC14.64□□□□□ -0.07
TM9SF2Q99805 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.64□□□□□ -0.07
TM9SF2Q99805 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF2Q99805 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF2Q99805 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF2Q99805 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF2Q99805 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.64□□□□□ -0.07
TM9SF2Q99805 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF2Q99805 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.64□□□□□ -0.07
TM9SF2Q99805 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.64□□□□□ -0.07
TM9SF2Q99805 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.64□□□□□ -0.07
TM9SF2Q99805 TREML5P-201ENST00000421694 576 ntBASIC14.64□□□□□ -0.07
TM9SF2Q99805 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.64□□□□□ -0.07
TM9SF2Q99805 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.64□□□□□ -0.07
TM9SF2Q99805 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF2Q99805 AL512638.1-201ENST00000457493 794 ntBASIC14.64□□□□□ -0.07
TM9SF2Q99805 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF2Q99805 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.64□□□□□ -0.07
TM9SF2Q99805 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF2Q99805 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.64□□□□□ -0.07
TM9SF2Q99805 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.64□□□□□ -0.07
TM9SF2Q99805 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF2Q99805 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.64□□□□□ -0.07
TM9SF2Q99805 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TM9SF2Q99805 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.64□□□□□ -0.07
TM9SF2Q99805 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF2Q99805 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF2Q99805 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.64□□□□□ -0.07
TM9SF2Q99805 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.64□□□□□ -0.07
TM9SF2Q99805 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.64□□□□□ -0.07
TM9SF2Q99805 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TM9SF2Q99805 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.64□□□□□ -0.07
TM9SF2Q99805 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF2Q99805 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF2Q99805 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF2Q99805 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF2Q99805 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
TM9SF2Q99805 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF2Q99805 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
TM9SF2Q99805 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF2Q99805 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TM9SF2Q99805 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF2Q99805 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF2Q99805 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TM9SF2Q99805 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF2Q99805 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.63□□□□□ -0.07
TM9SF2Q99805 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF2Q99805 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TM9SF2Q99805 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF2Q99805 FO538757.1-201ENST00000623083 1397 ntBASIC14.63□□□□□ -0.07
TM9SF2Q99805 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF2Q99805 AC006486.2-201ENST00000624246 2199 ntBASIC14.63□□□□□ -0.07
TM9SF2Q99805 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TM9SF2Q99805 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.63□□□□□ -0.07
TM9SF2Q99805 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF2Q99805 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TM9SF2Q99805 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.63□□□□□ -0.07
TM9SF2Q99805 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF2Q99805 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.63□□□□□ -0.07
TM9SF2Q99805 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TM9SF2Q99805 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TM9SF2Q99805 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TM9SF2Q99805 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.63□□□□□ -0.07
TM9SF2Q99805 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.63□□□□□ -0.07
TM9SF2Q99805 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.63□□□□□ -0.07
TM9SF2Q99805 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
TM9SF2Q99805 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms