Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM47Q96LD4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM47Q96LD4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM47Q96LD4 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM47Q96LD4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM47Q96LD4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM47Q96LD4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 LINC01144-201ENST00000626198 1710 ntBASIC18.32■□□□□ 0.52
TRIM47Q96LD4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 YBX1P6-201ENST00000442962 1002 ntBASIC18.32■□□□□ 0.52
TRIM47Q96LD4 FAM86LP-201ENST00000478302 853 ntBASIC18.32■□□□□ 0.52
TRIM47Q96LD4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM47Q96LD4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 PAUPAR-201ENST00000630360 2965 ntBASIC18.31■□□□□ 0.52
TRIM47Q96LD4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 POU5F1P6-201ENST00000466990 990 ntBASIC18.31■□□□□ 0.52
TRIM47Q96LD4 RNA5SP423-201ENST00000517127 109 ntBASIC18.31■□□□□ 0.52
TRIM47Q96LD4 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 ENPP7P5-201ENST00000541031 1031 ntBASIC18.31■□□□□ 0.52
TRIM47Q96LD4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM47Q96LD4 AL365203.3-201ENST00000609742 2057 ntBASIC18.3■□□□□ 0.52
TRIM47Q96LD4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms