Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCN1Q92616 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC13.24□□□□□ -0.29
GCN1Q92616 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.24□□□□□ -0.29
GCN1Q92616 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCN1Q92616 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
GCN1Q92616 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
GCN1Q92616 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
GCN1Q92616 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC13.24□□□□□ -0.29
GCN1Q92616 EIF3FP3-201ENST00000434851 1086 ntBASIC13.24□□□□□ -0.29
GCN1Q92616 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC13.24□□□□□ -0.29
GCN1Q92616 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC13.24□□□□□ -0.29
GCN1Q92616 AC226150.1-201ENST00000544259 466 ntBASIC13.24□□□□□ -0.29
GCN1Q92616 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC13.24□□□□□ -0.29
GCN1Q92616 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC13.24□□□□□ -0.29
GCN1Q92616 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCN1Q92616 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
GCN1Q92616 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCN1Q92616 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
GCN1Q92616 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCN1Q92616 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
GCN1Q92616 AC021305.1-201ENST00000520656 1514 ntBASIC13.24□□□□□ -0.29
GCN1Q92616 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
GCN1Q92616 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.24□□□□□ -0.29
GCN1Q92616 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCN1Q92616 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GCN1Q92616 AC093503.3-201ENST00000624917 2352 ntBASIC13.24□□□□□ -0.29
GCN1Q92616 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
GCN1Q92616 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
GCN1Q92616 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GCN1Q92616 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.24□□□□□ -0.29
GCN1Q92616 AC007326.1-201ENST00000604539 458 ntBASIC13.24□□□□□ -0.29
GCN1Q92616 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC13.24□□□□□ -0.29
GCN1Q92616 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC13.24□□□□□ -0.29
GCN1Q92616 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCN1Q92616 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCN1Q92616 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GCN1Q92616 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCN1Q92616 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GCN1Q92616 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
GCN1Q92616 E2F3P2-201ENST00000447755 1422 ntBASIC13.23□□□□□ -0.29
GCN1Q92616 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCN1Q92616 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GCN1Q92616 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
GCN1Q92616 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.23□□□□□ -0.29
GCN1Q92616 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
GCN1Q92616 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCN1Q92616 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCN1Q92616 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
GCN1Q92616 HMGA1P2-201ENST00000430198 324 ntBASIC13.23□□□□□ -0.29
GCN1Q92616 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC13.23□□□□□ -0.29
GCN1Q92616 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
GCN1Q92616 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC13.23□□□□□ -0.29
GCN1Q92616 ABCC6P2-201ENST00000526069 590 ntBASIC13.23□□□□□ -0.29
GCN1Q92616 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC13.23□□□□□ -0.29
GCN1Q92616 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC13.23□□□□□ -0.29
GCN1Q92616 NEK4P3-201ENST00000604859 544 ntBASIC13.23□□□□□ -0.29
GCN1Q92616 AP000322.3-201ENST00000608665 388 ntBASIC13.23□□□□□ -0.29
GCN1Q92616 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC13.23□□□□□ -0.29
GCN1Q92616 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCN1Q92616 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCN1Q92616 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
GCN1Q92616 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
GCN1Q92616 AL391256.1-201ENST00000443260 1855 ntBASIC13.23□□□□□ -0.29
GCN1Q92616 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.23□□□□□ -0.29
GCN1Q92616 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.23□□□□□ -0.29
GCN1Q92616 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC13.23□□□□□ -0.29
GCN1Q92616 AC007881.1-201ENST00000437460 187 ntBASIC13.23□□□□□ -0.29
GCN1Q92616 AC010894.2-201ENST00000444196 561 ntTSL 3 BASIC13.23□□□□□ -0.29
GCN1Q92616 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GCN1Q92616 CDK4P1-201ENST00000454213 828 ntBASIC13.23□□□□□ -0.29
GCN1Q92616 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC13.23□□□□□ -0.29
GCN1Q92616 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC13.23□□□□□ -0.29
GCN1Q92616 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GCN1Q92616 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC13.23□□□□□ -0.29
GCN1Q92616 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.23□□□□□ -0.29
GCN1Q92616 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.23□□□□□ -0.29
GCN1Q92616 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCN1Q92616 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
GCN1Q92616 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC13.23□□□□□ -0.29
GCN1Q92616 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.22□□□□□ -0.29
GCN1Q92616 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GCN1Q92616 AC244394.1-201ENST00000435000 1665 ntBASIC13.22□□□□□ -0.29
GCN1Q92616 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GCN1Q92616 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GCN1Q92616 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GCN1Q92616 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
GCN1Q92616 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC13.22□□□□□ -0.29
GCN1Q92616 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GCN1Q92616 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GCN1Q92616 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
GCN1Q92616 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC13.22□□□□□ -0.29
GCN1Q92616 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GCN1Q92616 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
GCN1Q92616 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC13.22□□□□□ -0.29
GCN1Q92616 AC092896.1-201ENST00000465850 380 ntBASIC13.22□□□□□ -0.29
GCN1Q92616 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC13.22□□□□□ -0.29
GCN1Q92616 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC13.22□□□□□ -0.29
GCN1Q92616 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.22□□□□□ -0.29
GCN1Q92616 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
GCN1Q92616 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms