Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 AC138028.6-201ENST00000616106 1482 ntBASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 AC022188.1-201ENST00000620960 1664 ntBASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 ACTG1P17-201ENST00000558391 1119 ntBASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 AL021578.1-201ENST00000613646 709 ntBASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 ENPP7P14-201ENST00000621765 1040 ntBASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAPGEF4Q8WZA2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RAPGEF4Q8WZA2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RAPGEF4Q8WZA2 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RAPGEF4Q8WZA2 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RAPGEF4Q8WZA2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 HNRNPA1P32-201ENST00000396326 963 ntBASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 PTPA-218ENST00000435132 618 ntTSL 2 BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 AC004066.1-201ENST00000502488 802 ntBASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 NEU3-202ENST00000526068 431 ntTSL 2 BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 AC020914.3-201ENST00000594712 304 ntBASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.32■□□□□ 0.84
RAPGEF4Q8WZA2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAPGEF4Q8WZA2 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAPGEF4Q8WZA2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAPGEF4Q8WZA2 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAPGEF4Q8WZA2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAPGEF4Q8WZA2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC20.31■□□□□ 0.84
RAPGEF4Q8WZA2 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RAPGEF4Q8WZA2 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAPGEF4Q8WZA2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.31■□□□□ 0.84
RAPGEF4Q8WZA2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RAPGEF4Q8WZA2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAPGEF4Q8WZA2 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC20.31■□□□□ 0.84
RAPGEF4Q8WZA2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RAPGEF4Q8WZA2 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAPGEF4Q8WZA2 AC007787.1-201ENST00000588095 1583 ntBASIC20.31■□□□□ 0.84
RAPGEF4Q8WZA2 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAPGEF4Q8WZA2 AL645937.2-201ENST00000396808 931 ntBASIC20.31■□□□□ 0.84
RAPGEF4Q8WZA2 MIR663B-201ENST00000408361 115 ntBASIC20.31■□□□□ 0.84
RAPGEF4Q8WZA2 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC20.31■□□□□ 0.84
RAPGEF4Q8WZA2 FNTAP2-201ENST00000430308 634 ntBASIC20.31■□□□□ 0.84
RAPGEF4Q8WZA2 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
RAPGEF4Q8WZA2 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms