Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 AC090616.6-203ENST00000579186 1945 ntBASIC13.66□□□□□ -0.22
CCDC107Q8WV48 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 AC025580.3-201ENST00000617932 1424 ntBASIC13.65□□□□□ -0.22
CCDC107Q8WV48 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 RHOQP3-201ENST00000437982 621 ntBASIC13.65□□□□□ -0.22
CCDC107Q8WV48 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 AL009183.1-201ENST00000603760 355 ntBASIC13.65□□□□□ -0.22
CCDC107Q8WV48 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 AC004877.2-201ENST00000623941 599 ntBASIC13.65□□□□□ -0.22
CCDC107Q8WV48 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 LINC00552-201ENST00000625151 2579 ntBASIC13.65□□□□□ -0.22
CCDC107Q8WV48 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CCDC107Q8WV48 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 AC105250.1-201ENST00000509378 2057 ntBASIC13.64□□□□□ -0.23
CCDC107Q8WV48 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 HAUS4P1-201ENST00000406739 1145 ntBASIC13.64□□□□□ -0.23
CCDC107Q8WV48 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms