Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 AC098850.1-201ENST00000419919 790 ntBASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 BCYRN1-201ENST00000418539 200 ntBASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 AC007431.3-201ENST00000623221 587 ntBASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 REXO1L4P-201ENST00000605109 1937 ntBASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SHROOM3Q8TF72 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 RPL5P21-201ENST00000404620 815 ntBASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 AL512638.1-201ENST00000457493 794 ntBASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms