Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC069224.1-201ENST00000566372 1715 ntBASIC18.73■□□□□ 0.59
SNED1Q8TER0 AC124067.4-201ENST00000519691 2379 ntBASIC18.73■□□□□ 0.59
SNED1Q8TER0 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNED1Q8TER0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.73■□□□□ 0.59
SNED1Q8TER0 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNED1Q8TER0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNED1Q8TER0 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNED1Q8TER0 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNED1Q8TER0 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SNED1Q8TER0 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNED1Q8TER0 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC18.73■□□□□ 0.59
SNED1Q8TER0 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNED1Q8TER0 FTLP1-201ENST00000449155 526 ntBASIC18.73■□□□□ 0.59
SNED1Q8TER0 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNED1Q8TER0 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNED1Q8TER0 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNED1Q8TER0 AC004466.1-201ENST00000599515 1080 ntBASIC18.73■□□□□ 0.59
SNED1Q8TER0 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC18.73■□□□□ 0.59
SNED1Q8TER0 AL645728.2-202ENST00000641679 227 ntBASIC18.73■□□□□ 0.59
SNED1Q8TER0 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNED1Q8TER0 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNED1Q8TER0 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNED1Q8TER0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNED1Q8TER0 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC18.73■□□□□ 0.59
SNED1Q8TER0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SNED1Q8TER0 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.72■□□□□ 0.59
SNED1Q8TER0 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC18.72■□□□□ 0.59
SNED1Q8TER0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SNED1Q8TER0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNED1Q8TER0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNED1Q8TER0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.72■□□□□ 0.59
SNED1Q8TER0 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNED1Q8TER0 NPPA-201ENST00000376476 728 ntTSL 3 BASIC18.72■□□□□ 0.59
SNED1Q8TER0 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNED1Q8TER0 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNED1Q8TER0 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC18.72■□□□□ 0.59
SNED1Q8TER0 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNED1Q8TER0 OARD1-204ENST00000464633 717 ntTSL 2 BASIC18.72■□□□□ 0.59
SNED1Q8TER0 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC18.72■□□□□ 0.59
SNED1Q8TER0 AC103988.2-201ENST00000561804 725 ntBASIC18.72■□□□□ 0.59
SNED1Q8TER0 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC18.72■□□□□ 0.59
SNED1Q8TER0 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC18.72■□□□□ 0.59
SNED1Q8TER0 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC18.72■□□□□ 0.59
SNED1Q8TER0 CDK7-214ENST00000626796 358 ntTSL 5 BASIC18.72■□□□□ 0.59
SNED1Q8TER0 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC18.72■□□□□ 0.59
SNED1Q8TER0 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNED1Q8TER0 KRT8P4-201ENST00000509735 1454 ntBASIC18.72■□□□□ 0.59
SNED1Q8TER0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNED1Q8TER0 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.72■□□□□ 0.59
SNED1Q8TER0 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNED1Q8TER0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.72■□□□□ 0.59
SNED1Q8TER0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.71■□□□□ 0.59
SNED1Q8TER0 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNED1Q8TER0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNED1Q8TER0 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SNED1Q8TER0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNED1Q8TER0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SNED1Q8TER0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SNED1Q8TER0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNED1Q8TER0 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.71■□□□□ 0.59
SNED1Q8TER0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNED1Q8TER0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNED1Q8TER0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SNED1Q8TER0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNED1Q8TER0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.71■□□□□ 0.59
SNED1Q8TER0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.71■□□□□ 0.59
SNED1Q8TER0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNED1Q8TER0 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.71■□□□□ 0.59
SNED1Q8TER0 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC18.71■□□□□ 0.59
SNED1Q8TER0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNED1Q8TER0 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SNED1Q8TER0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.71■□□□□ 0.59
SNED1Q8TER0 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNED1Q8TER0 AL008707.1-201ENST00000422498 534 ntBASIC18.71■□□□□ 0.59
SNED1Q8TER0 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC18.71■□□□□ 0.59
SNED1Q8TER0 EEF1DP6-201ENST00000449232 372 ntBASIC18.71■□□□□ 0.59
SNED1Q8TER0 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.71■□□□□ 0.59
SNED1Q8TER0 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNED1Q8TER0 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC18.71■□□□□ 0.59
SNED1Q8TER0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SNED1Q8TER0 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNED1Q8TER0 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC18.71■□□□□ 0.59
SNED1Q8TER0 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SNED1Q8TER0 AL161670.2-201ENST00000557650 1227 ntBASIC18.71■□□□□ 0.59
SNED1Q8TER0 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.71■□□□□ 0.59
SNED1Q8TER0 RN7SL555P-201ENST00000584742 339 ntBASIC18.71■□□□□ 0.59
SNED1Q8TER0 AP003419.4-201ENST00000616071 517 ntBASIC18.71■□□□□ 0.59
SNED1Q8TER0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SNED1Q8TER0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.71■□□□□ 0.59
SNED1Q8TER0 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNED1Q8TER0 AC018695.7-201ENST00000624587 2492 ntBASIC18.7■□□□□ 0.58
SNED1Q8TER0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC18.7■□□□□ 0.58
SNED1Q8TER0 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNED1Q8TER0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNED1Q8TER0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
SNED1Q8TER0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNED1Q8TER0 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNED1Q8TER0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.7■□□□□ 0.58
SNED1Q8TER0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNED1Q8TER0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms