Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.12■□□□□ 0.49
NEDD1Q8NHV4 MIR6805-201ENST00000615055 62 ntBASIC18.12■□□□□ 0.49
NEDD1Q8NHV4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
NEDD1Q8NHV4 PRSS30P-206ENST00000641773 873 ntBASIC18.12■□□□□ 0.49
NEDD1Q8NHV4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.12■□□□□ 0.49
NEDD1Q8NHV4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NEDD1Q8NHV4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
NEDD1Q8NHV4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NEDD1Q8NHV4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEDD1Q8NHV4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.12■□□□□ 0.49
NEDD1Q8NHV4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NEDD1Q8NHV4 TNRC18P3-201ENST00000441896 2691 ntBASIC18.12■□□□□ 0.49
NEDD1Q8NHV4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEDD1Q8NHV4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEDD1Q8NHV4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEDD1Q8NHV4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.12■□□□□ 0.49
NEDD1Q8NHV4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 MIR658-201ENST00000385210 100 ntBASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 MIR4259-201ENST00000584466 101 ntBASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 PDIA3P1-201ENST00000471856 1510 ntBASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 AC007787.1-201ENST00000588095 1583 ntBASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NEDD1Q8NHV4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 AC020658.6-201ENST00000623564 1870 ntBASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 AC104457.1-201ENST00000401024 814 ntBASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 AC004066.1-201ENST00000502488 802 ntBASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 GNRHR2-203ENST00000581100 1187 ntBASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
NEDD1Q8NHV4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NEDD1Q8NHV4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NEDD1Q8NHV4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NEDD1Q8NHV4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NEDD1Q8NHV4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
NEDD1Q8NHV4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.09■□□□□ 0.49
NEDD1Q8NHV4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.09■□□□□ 0.49
NEDD1Q8NHV4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18.09■□□□□ 0.49
NEDD1Q8NHV4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.09■□□□□ 0.49
NEDD1Q8NHV4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.09■□□□□ 0.49
NEDD1Q8NHV4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NEDD1Q8NHV4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.09■□□□□ 0.49
NEDD1Q8NHV4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NEDD1Q8NHV4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NEDD1Q8NHV4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NEDD1Q8NHV4 NUS1P3-201ENST00000423502 862 ntBASIC18.09■□□□□ 0.49
NEDD1Q8NHV4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.09■□□□□ 0.49
NEDD1Q8NHV4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.09■□□□□ 0.49
NEDD1Q8NHV4 FTH1P14-201ENST00000482930 551 ntBASIC18.09■□□□□ 0.49
NEDD1Q8NHV4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NEDD1Q8NHV4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms