Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BEST2Q8NFU1 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 AC092127.1-201ENST00000567093 3455 ntBASIC16.8■□□□□ 0.28
BEST2Q8NFU1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 C1QBPP1-201ENST00000400117 770 ntBASIC16.8■□□□□ 0.28
BEST2Q8NFU1 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 CICP13-201ENST00000422015 2789 ntBASIC16.8■□□□□ 0.28
BEST2Q8NFU1 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.8■□□□□ 0.28
BEST2Q8NFU1 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.79■□□□□ 0.28
BEST2Q8NFU1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 ARSEP1-201ENST00000420443 635 ntBASIC16.79■□□□□ 0.28
BEST2Q8NFU1 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 AC124283.3-201ENST00000570869 594 ntBASIC16.79■□□□□ 0.28
BEST2Q8NFU1 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 AL162274.1-201ENST00000617191 1098 ntBASIC16.79■□□□□ 0.28
BEST2Q8NFU1 CU634019.7-201ENST00000624153 1185 ntBASIC16.79■□□□□ 0.28
BEST2Q8NFU1 FP236241.2-201ENST00000624906 1185 ntBASIC16.79■□□□□ 0.28
BEST2Q8NFU1 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST2Q8NFU1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 AC022188.1-201ENST00000620960 1664 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms