Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LSMEM1Q8N8F7 AC007686.3-201ENST00000619017 3487 ntBASIC14.42□□□□□ -0.1
LSMEM1Q8N8F7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LSMEM1Q8N8F7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 AC107918.4-201ENST00000641966 3141 ntBASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 AC126365.1-201ENST00000578585 1514 ntBASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LSMEM1Q8N8F7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 KRT8P44-201ENST00000441609 1350 ntBASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 MIR4453-201ENST00000584019 89 ntBASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LSMEM1Q8N8F7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms