Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 BCRP2-202ENST00000447763 634 ntBASIC15.96■□□□□ 0.15
CHPFQ8IZ52 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 BCRP6-201ENST00000510112 632 ntBASIC15.96■□□□□ 0.15
CHPFQ8IZ52 BCRP7-201ENST00000511549 544 ntBASIC15.96■□□□□ 0.15
CHPFQ8IZ52 AC120045.2-201ENST00000567334 178 ntBASIC15.96■□□□□ 0.15
CHPFQ8IZ52 AC124283.3-201ENST00000570869 594 ntBASIC15.96■□□□□ 0.15
CHPFQ8IZ52 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 AL596257.1-201ENST00000641463 2694 ntBASIC15.96■□□□□ 0.15
CHPFQ8IZ52 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHPFQ8IZ52 AC132872.4-202ENST00000622924 2756 ntBASIC15.96■□□□□ 0.15
CHPFQ8IZ52 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CHPFQ8IZ52 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.96■□□□□ 0.14
CHPFQ8IZ52 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.96■□□□□ 0.14
CHPFQ8IZ52 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 PDIA3P1-201ENST00000471856 1510 ntBASIC15.95■□□□□ 0.14
CHPFQ8IZ52 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 ANKRD19P-201ENST00000338192 862 ntBASIC15.95■□□□□ 0.14
CHPFQ8IZ52 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 CTBP2P5-201ENST00000454986 1264 ntBASIC15.95■□□□□ 0.14
CHPFQ8IZ52 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CHPFQ8IZ52 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHPFQ8IZ52 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHPFQ8IZ52 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.94■□□□□ 0.14
CHPFQ8IZ52 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CHPFQ8IZ52 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.94■□□□□ 0.14
CHPFQ8IZ52 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHPFQ8IZ52 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.94■□□□□ 0.14
CHPFQ8IZ52 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHPFQ8IZ52 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHPFQ8IZ52 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms