Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 TSPY5P-201ENST00000426936 936 ntBASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 KRT18P38-201ENST00000449496 1282 ntBASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 AC005622.1-201ENST00000636801 1703 ntBASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CROCCP3Q8IVE0 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CROCCP3Q8IVE0 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CROCCP3Q8IVE0 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
CROCCP3Q8IVE0 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.27□□□□□ -0.12
CROCCP3Q8IVE0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.27□□□□□ -0.12
CROCCP3Q8IVE0 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CROCCP3Q8IVE0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CROCCP3Q8IVE0 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.27□□□□□ -0.12
CROCCP3Q8IVE0 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CROCCP3Q8IVE0 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CROCCP3Q8IVE0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CROCCP3Q8IVE0 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC14.27□□□□□ -0.12
CROCCP3Q8IVE0 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
CROCCP3Q8IVE0 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CROCCP3Q8IVE0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CROCCP3Q8IVE0 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CROCCP3Q8IVE0 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CROCCP3Q8IVE0 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 RNF152P1-201ENST00000397754 604 ntBASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 AL645929.1-201ENST00000420084 975 ntBASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 AC010203.1-204ENST00000548782 407 ntBASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CROCCP3Q8IVE0 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 AC083964.2-201ENST00000623988 2396 ntBASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CROCCP3Q8IVE0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms