Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 FAM8A3P-201ENST00000427218 844 ntBASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 AC105233.2-201ENST00000523697 349 ntBASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 AF228730.5-201ENST00000530288 346 ntBASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 KRT19P2-202ENST00000557173 1012 ntBASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRRTM1Q86UE6 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 AL031284.1-201ENST00000419297 478 ntBASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 AC079781.3-201ENST00000449110 356 ntBASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 IGHV3-22-201ENST00000520721 359 ntBASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 HNRNPUP1-201ENST00000554987 333 ntBASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 AL773604.1-201ENST00000617417 272 ntBASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 CYP4F24P-201ENST00000586049 1580 ntBASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 OR2I1P-210ENST00000642037 4691 ntBASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRTM1Q86UE6 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
LRRTM1Q86UE6 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
LRRTM1Q86UE6 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.23
LRRTM1Q86UE6 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.23
LRRTM1Q86UE6 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
LRRTM1Q86UE6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms