Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC10.49□□□□□ -0.73
SCXQ7RTU7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC10.49□□□□□ -0.73
SCXQ7RTU7 SIGLEC29P-201ENST00000599873 1114 ntBASIC10.49□□□□□ -0.73
SCXQ7RTU7 AC239800.4-201ENST00000603712 296 ntBASIC10.49□□□□□ -0.73
SCXQ7RTU7 AC003101.2-201ENST00000612557 442 ntBASIC10.49□□□□□ -0.73
SCXQ7RTU7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SCXQ7RTU7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC10.49□□□□□ -0.73
SCXQ7RTU7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC10.49□□□□□ -0.73
SCXQ7RTU7 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SCXQ7RTU7 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SCXQ7RTU7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
SCXQ7RTU7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SCXQ7RTU7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC10.49□□□□□ -0.73
SCXQ7RTU7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SCXQ7RTU7 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SCXQ7RTU7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
SCXQ7RTU7 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
SCXQ7RTU7 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
SCXQ7RTU7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SCXQ7RTU7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SCXQ7RTU7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC10.49□□□□□ -0.73
SCXQ7RTU7 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SCXQ7RTU7 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SCXQ7RTU7 AC104581.4-201ENST00000623126 3052 ntBASIC10.49□□□□□ -0.73
SCXQ7RTU7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SCXQ7RTU7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC10.49□□□□□ -0.73
SCXQ7RTU7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SCXQ7RTU7 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SCXQ7RTU7 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SCXQ7RTU7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
SCXQ7RTU7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 CICP13-201ENST00000422015 2789 ntBASIC10.48□□□□□ -0.73
SCXQ7RTU7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 AC097493.3-201ENST00000509725 367 ntBASIC10.48□□□□□ -0.73
SCXQ7RTU7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 RN7SL204P-201ENST00000582831 262 ntBASIC10.48□□□□□ -0.73
SCXQ7RTU7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC10.48□□□□□ -0.73
SCXQ7RTU7 AC018529.1-201ENST00000613063 361 ntBASIC10.48□□□□□ -0.73
SCXQ7RTU7 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 RHBDF1P1-201ENST00000427504 1941 ntBASIC10.48□□□□□ -0.73
SCXQ7RTU7 AC092053.1-201ENST00000605787 1936 ntBASIC10.48□□□□□ -0.73
SCXQ7RTU7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC10.48□□□□□ -0.73
SCXQ7RTU7 CICP4-201ENST00000447359 2812 ntBASIC10.48□□□□□ -0.73
SCXQ7RTU7 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SCXQ7RTU7 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms