Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAPH1Q70E73 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAPH1Q70E73 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAPH1Q70E73 AC009090.5-201ENST00000624886 2285 ntBASIC15.84■□□□□ 0.13
RAPH1Q70E73 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.84■□□□□ 0.13
RAPH1Q70E73 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAPH1Q70E73 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAPH1Q70E73 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.84■□□□□ 0.13
RAPH1Q70E73 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAPH1Q70E73 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
RAPH1Q70E73 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.84■□□□□ 0.13
RAPH1Q70E73 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAPH1Q70E73 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RAPH1Q70E73 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
RAPH1Q70E73 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAPH1Q70E73 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
RAPH1Q70E73 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
RAPH1Q70E73 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAPH1Q70E73 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAPH1Q70E73 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.84■□□□□ 0.13
RAPH1Q70E73 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.84■□□□□ 0.13
RAPH1Q70E73 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.84■□□□□ 0.13
RAPH1Q70E73 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.84■□□□□ 0.13
RAPH1Q70E73 RN7SL589P-201ENST00000481268 310 ntBASIC15.84■□□□□ 0.13
RAPH1Q70E73 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.84■□□□□ 0.13
RAPH1Q70E73 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAPH1Q70E73 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
RAPH1Q70E73 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.84■□□□□ 0.13
RAPH1Q70E73 BX640515.1-201ENST00000617215 977 ntBASIC15.84■□□□□ 0.13
RAPH1Q70E73 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.84■□□□□ 0.13
RAPH1Q70E73 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.84■□□□□ 0.13
RAPH1Q70E73 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RAPH1Q70E73 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
RAPH1Q70E73 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.84■□□□□ 0.13
RAPH1Q70E73 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.84■□□□□ 0.13
RAPH1Q70E73 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.84■□□□□ 0.13
RAPH1Q70E73 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
RAPH1Q70E73 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAPH1Q70E73 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.84■□□□□ 0.13
RAPH1Q70E73 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAPH1Q70E73 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RAPH1Q70E73 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAPH1Q70E73 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAPH1Q70E73 C18orf15-201ENST00000623680 2534 ntBASIC15.84■□□□□ 0.13
RAPH1Q70E73 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAPH1Q70E73 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAPH1Q70E73 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.83■□□□□ 0.13
RAPH1Q70E73 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
RAPH1Q70E73 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAPH1Q70E73 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.83■□□□□ 0.13
RAPH1Q70E73 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAPH1Q70E73 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAPH1Q70E73 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAPH1Q70E73 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAPH1Q70E73 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAPH1Q70E73 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
RAPH1Q70E73 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAPH1Q70E73 AC023274.1-201ENST00000418278 595 ntBASIC15.83■□□□□ 0.12
RAPH1Q70E73 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RAPH1Q70E73 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.83■□□□□ 0.12
RAPH1Q70E73 SPDYE11-202ENST00000450699 704 ntBASIC15.83■□□□□ 0.12
RAPH1Q70E73 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
RAPH1Q70E73 IGHV3-62-201ENST00000520057 340 ntBASIC15.83■□□□□ 0.12
RAPH1Q70E73 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAPH1Q70E73 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.83■□□□□ 0.12
RAPH1Q70E73 SPDYE9P-201ENST00000570642 692 ntBASIC15.83■□□□□ 0.12
RAPH1Q70E73 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAPH1Q70E73 SPDYE10P-202ENST00000612005 668 ntBASIC15.83■□□□□ 0.12
RAPH1Q70E73 SPDYE8P-202ENST00000612377 668 ntBASIC15.83■□□□□ 0.12
RAPH1Q70E73 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAPH1Q70E73 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAPH1Q70E73 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAPH1Q70E73 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAPH1Q70E73 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAPH1Q70E73 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAPH1Q70E73 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RAPH1Q70E73 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.83■□□□□ 0.12
RAPH1Q70E73 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.83■□□□□ 0.12
RAPH1Q70E73 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAPH1Q70E73 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.83■□□□□ 0.12
RAPH1Q70E73 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAPH1Q70E73 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.83■□□□□ 0.12
RAPH1Q70E73 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAPH1Q70E73 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAPH1Q70E73 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.82■□□□□ 0.12
RAPH1Q70E73 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAPH1Q70E73 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
RAPH1Q70E73 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAPH1Q70E73 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAPH1Q70E73 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAPH1Q70E73 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.82■□□□□ 0.12
RAPH1Q70E73 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAPH1Q70E73 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RAPH1Q70E73 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAPH1Q70E73 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
RAPH1Q70E73 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAPH1Q70E73 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RAPH1Q70E73 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAPH1Q70E73 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RAPH1Q70E73 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms