Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CTR9Q6PD62 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.58■□□□□ 0.57
CTR9Q6PD62 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.58■□□□□ 0.57
CTR9Q6PD62 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
CTR9Q6PD62 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTR9Q6PD62 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CTR9Q6PD62 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTR9Q6PD62 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CTR9Q6PD62 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CTR9Q6PD62 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.58■□□□□ 0.56
CTR9Q6PD62 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CTR9Q6PD62 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTR9Q6PD62 VDAC1P7-201ENST00000462417 847 ntBASIC18.58■□□□□ 0.56
CTR9Q6PD62 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CTR9Q6PD62 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CTR9Q6PD62 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CTR9Q6PD62 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.58■□□□□ 0.56
CTR9Q6PD62 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.58■□□□□ 0.56
CTR9Q6PD62 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.58■□□□□ 0.56
CTR9Q6PD62 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.58■□□□□ 0.56
CTR9Q6PD62 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.58■□□□□ 0.56
CTR9Q6PD62 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CTR9Q6PD62 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CTR9Q6PD62 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CTR9Q6PD62 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTR9Q6PD62 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.58■□□□□ 0.56
CTR9Q6PD62 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.58■□□□□ 0.56
CTR9Q6PD62 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CTR9Q6PD62 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTR9Q6PD62 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTR9Q6PD62 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTR9Q6PD62 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTR9Q6PD62 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTR9Q6PD62 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTR9Q6PD62 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTR9Q6PD62 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTR9Q6PD62 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTR9Q6PD62 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTR9Q6PD62 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CTR9Q6PD62 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTR9Q6PD62 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTR9Q6PD62 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTR9Q6PD62 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CTR9Q6PD62 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.57■□□□□ 0.56
CTR9Q6PD62 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTR9Q6PD62 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.57■□□□□ 0.56
CTR9Q6PD62 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CTR9Q6PD62 U91328.1-201ENST00000437528 223 ntBASIC18.57■□□□□ 0.56
CTR9Q6PD62 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTR9Q6PD62 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.57■□□□□ 0.56
CTR9Q6PD62 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTR9Q6PD62 AC124283.3-201ENST00000570869 594 ntBASIC18.57■□□□□ 0.56
CTR9Q6PD62 AC133539.2-201ENST00000604757 467 ntBASIC18.57■□□□□ 0.56
CTR9Q6PD62 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTR9Q6PD62 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.57■□□□□ 0.56
CTR9Q6PD62 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.57■□□□□ 0.56
CTR9Q6PD62 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
CTR9Q6PD62 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CTR9Q6PD62 AC092127.1-201ENST00000567093 3455 ntBASIC18.57■□□□□ 0.56
CTR9Q6PD62 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
CTR9Q6PD62 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTR9Q6PD62 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.57■□□□□ 0.56
CTR9Q6PD62 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTR9Q6PD62 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTR9Q6PD62 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.57■□□□□ 0.56
CTR9Q6PD62 PRAL-201ENST00000624952 3286 ntBASIC18.57■□□□□ 0.56
CTR9Q6PD62 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTR9Q6PD62 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTR9Q6PD62 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.57■□□□□ 0.56
CTR9Q6PD62 TCAF2P1-201ENST00000291129 2421 ntBASIC18.57■□□□□ 0.56
CTR9Q6PD62 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
CTR9Q6PD62 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.56■□□□□ 0.56
CTR9Q6PD62 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.56■□□□□ 0.56
CTR9Q6PD62 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.56■□□□□ 0.56
CTR9Q6PD62 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTR9Q6PD62 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.56■□□□□ 0.56
CTR9Q6PD62 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.56■□□□□ 0.56
CTR9Q6PD62 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CTR9Q6PD62 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTR9Q6PD62 CICP13-201ENST00000422015 2789 ntBASIC18.56■□□□□ 0.56
CTR9Q6PD62 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTR9Q6PD62 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CTR9Q6PD62 INTS4P2-202ENST00000614726 2019 ntBASIC18.56■□□□□ 0.56
CTR9Q6PD62 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CTR9Q6PD62 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTR9Q6PD62 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTR9Q6PD62 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.56■□□□□ 0.56
CTR9Q6PD62 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTR9Q6PD62 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTR9Q6PD62 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.56■□□□□ 0.56
CTR9Q6PD62 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.56■□□□□ 0.56
CTR9Q6PD62 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.56■□□□□ 0.56
CTR9Q6PD62 AC134915.1-201ENST00000426461 574 ntBASIC18.56■□□□□ 0.56
CTR9Q6PD62 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.56■□□□□ 0.56
CTR9Q6PD62 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.56■□□□□ 0.56
CTR9Q6PD62 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.56■□□□□ 0.56
CTR9Q6PD62 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.56■□□□□ 0.56
CTR9Q6PD62 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTR9Q6PD62 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CTR9Q6PD62 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms