Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KCNA1Q09470 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KCNA1Q09470 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KCNA1Q09470 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.21■□□□□ 0.35
KCNA1Q09470 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KCNA1Q09470 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
KCNA1Q09470 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KCNA1Q09470 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
KCNA1Q09470 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KCNA1Q09470 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
KCNA1Q09470 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.21■□□□□ 0.35
KCNA1Q09470 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.21■□□□□ 0.35
KCNA1Q09470 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.21■□□□□ 0.35
KCNA1Q09470 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.21■□□□□ 0.35
KCNA1Q09470 AC023310.3-201ENST00000557027 670 ntBASIC17.21■□□□□ 0.35
KCNA1Q09470 AC100756.1-201ENST00000562736 682 ntBASIC17.21■□□□□ 0.35
KCNA1Q09470 AC138749.3-201ENST00000567691 622 ntBASIC17.21■□□□□ 0.35
KCNA1Q09470 RN7SL204P-201ENST00000582831 262 ntBASIC17.21■□□□□ 0.35
KCNA1Q09470 AC116165.1-201ENST00000611806 668 ntBASIC17.21■□□□□ 0.35
KCNA1Q09470 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.21■□□□□ 0.35
KCNA1Q09470 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.21■□□□□ 0.35
KCNA1Q09470 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
KCNA1Q09470 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
KCNA1Q09470 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KCNA1Q09470 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
KCNA1Q09470 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
KCNA1Q09470 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
KCNA1Q09470 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KCNA1Q09470 AC022532.1-201ENST00000624563 1728 ntBASIC17.21■□□□□ 0.35
KCNA1Q09470 AL121723.1-201ENST00000445194 1519 ntBASIC17.21■□□□□ 0.34
KCNA1Q09470 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.21■□□□□ 0.34
KCNA1Q09470 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.21■□□□□ 0.34
KCNA1Q09470 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
KCNA1Q09470 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KCNA1Q09470 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
KCNA1Q09470 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KCNA1Q09470 AP002414.2-201ENST00000591780 3365 ntBASIC17.2■□□□□ 0.34
KCNA1Q09470 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KCNA1Q09470 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.2■□□□□ 0.34
KCNA1Q09470 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KCNA1Q09470 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
KCNA1Q09470 AC104640.1-201ENST00000562617 2109 ntBASIC17.2■□□□□ 0.34
KCNA1Q09470 CLK3P2-201ENST00000427566 1453 ntBASIC17.2■□□□□ 0.34
KCNA1Q09470 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.2■□□□□ 0.34
KCNA1Q09470 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
KCNA1Q09470 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KCNA1Q09470 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.2■□□□□ 0.34
KCNA1Q09470 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KCNA1Q09470 SPDYE19P-201ENST00000338590 713 ntBASIC17.2■□□□□ 0.34
KCNA1Q09470 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KCNA1Q09470 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KCNA1Q09470 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.2■□□□□ 0.34
KCNA1Q09470 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.2■□□□□ 0.34
KCNA1Q09470 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.2■□□□□ 0.34
KCNA1Q09470 SPTLC1P1-201ENST00000447199 261 ntBASIC17.2■□□□□ 0.34
KCNA1Q09470 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.2■□□□□ 0.34
KCNA1Q09470 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.2■□□□□ 0.34
KCNA1Q09470 TIMM17BP1-201ENST00000545713 516 ntBASIC17.2■□□□□ 0.34
KCNA1Q09470 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.2■□□□□ 0.34
KCNA1Q09470 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
KCNA1Q09470 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.2■□□□□ 0.34
KCNA1Q09470 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.2■□□□□ 0.34
KCNA1Q09470 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.2■□□□□ 0.34
KCNA1Q09470 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.2■□□□□ 0.34
KCNA1Q09470 AL158212.4-201ENST00000624062 1286 ntBASIC17.2■□□□□ 0.34
KCNA1Q09470 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.2■□□□□ 0.34
KCNA1Q09470 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KCNA1Q09470 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.2■□□□□ 0.34
KCNA1Q09470 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KCNA1Q09470 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.2■□□□□ 0.34
KCNA1Q09470 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
KCNA1Q09470 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.2■□□□□ 0.34
KCNA1Q09470 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
KCNA1Q09470 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
KCNA1Q09470 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.2■□□□□ 0.34
KCNA1Q09470 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KCNA1Q09470 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KCNA1Q09470 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KCNA1Q09470 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KCNA1Q09470 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KCNA1Q09470 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KCNA1Q09470 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KCNA1Q09470 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KCNA1Q09470 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
KCNA1Q09470 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KCNA1Q09470 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
KCNA1Q09470 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KCNA1Q09470 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KCNA1Q09470 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
KCNA1Q09470 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KCNA1Q09470 AC091951.1-201ENST00000512854 2465 ntBASIC17.19■□□□□ 0.34
KCNA1Q09470 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.19■□□□□ 0.34
KCNA1Q09470 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.19■□□□□ 0.34
KCNA1Q09470 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.19■□□□□ 0.34
KCNA1Q09470 AC236430.1-201ENST00000402231 743 ntBASIC17.19■□□□□ 0.34
KCNA1Q09470 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.19■□□□□ 0.34
KCNA1Q09470 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.19■□□□□ 0.34
KCNA1Q09470 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.19■□□□□ 0.34
KCNA1Q09470 MEIS3P1-201ENST00000495167 958 ntBASIC17.19■□□□□ 0.34
KCNA1Q09470 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms