Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC20.44■□□□□ 0.86
COL16A1Q07092 THY1-209ENST00000580275 578 ntTSL 3 BASIC20.44■□□□□ 0.86
COL16A1Q07092 SIGLEC18P-201ENST00000602271 909 ntBASIC20.44■□□□□ 0.86
COL16A1Q07092 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC20.44■□□□□ 0.86
COL16A1Q07092 MIR6769A-201ENST00000617340 73 ntBASIC20.44■□□□□ 0.86
COL16A1Q07092 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC20.44■□□□□ 0.86
COL16A1Q07092 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL16A1Q07092 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL16A1Q07092 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL16A1Q07092 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL16A1Q07092 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
COL16A1Q07092 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL16A1Q07092 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL16A1Q07092 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL16A1Q07092 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL16A1Q07092 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL16A1Q07092 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL16A1Q07092 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL16A1Q07092 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL16A1Q07092 MIR648-201ENST00000385046 94 ntBASIC20.43■□□□□ 0.86
COL16A1Q07092 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL16A1Q07092 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL16A1Q07092 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL16A1Q07092 PGAM1P12-201ENST00000505622 748 ntBASIC20.43■□□□□ 0.86
COL16A1Q07092 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC20.43■□□□□ 0.86
COL16A1Q07092 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC20.43■□□□□ 0.86
COL16A1Q07092 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC20.43■□□□□ 0.86
COL16A1Q07092 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
COL16A1Q07092 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
COL16A1Q07092 AL627230.2-201ENST00000613254 655 ntBASIC20.43■□□□□ 0.86
COL16A1Q07092 PTPN20CP-201ENST00000614090 920 ntBASIC20.43■□□□□ 0.86
COL16A1Q07092 KRT18P9-201ENST00000604826 1300 ntBASIC20.43■□□□□ 0.86
COL16A1Q07092 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL16A1Q07092 STK26-204ENST00000481105 1835 ntTSL 2 BASIC20.43■□□□□ 0.86
COL16A1Q07092 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
COL16A1Q07092 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL16A1Q07092 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL16A1Q07092 LINC01815-202ENST00000641468 1409 ntBASIC20.43■□□□□ 0.86
COL16A1Q07092 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL16A1Q07092 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.43■□□□□ 0.86
COL16A1Q07092 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL16A1Q07092 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL16A1Q07092 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
COL16A1Q07092 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
COL16A1Q07092 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL16A1Q07092 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.43■□□□□ 0.86
COL16A1Q07092 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL16A1Q07092 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL16A1Q07092 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
COL16A1Q07092 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL16A1Q07092 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL16A1Q07092 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
COL16A1Q07092 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC20.42■□□□□ 0.86
COL16A1Q07092 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL16A1Q07092 AL354861.1-201ENST00000445213 355 ntBASIC20.42■□□□□ 0.86
COL16A1Q07092 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL16A1Q07092 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL16A1Q07092 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC20.42■□□□□ 0.86
COL16A1Q07092 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC20.42■□□□□ 0.86
COL16A1Q07092 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC20.42■□□□□ 0.86
COL16A1Q07092 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC20.42■□□□□ 0.86
COL16A1Q07092 AC120498.9-201ENST00000339021 3867 ntBASIC20.42■□□□□ 0.86
COL16A1Q07092 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL16A1Q07092 AL645608.8-201ENST00000606034 2086 ntBASIC20.42■□□□□ 0.86
COL16A1Q07092 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC20.42■□□□□ 0.86
COL16A1Q07092 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
COL16A1Q07092 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC20.42■□□□□ 0.86
COL16A1Q07092 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
COL16A1Q07092 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.42■□□□□ 0.86
COL16A1Q07092 AC006058.4-201ENST00000624016 1670 ntBASIC20.42■□□□□ 0.86
COL16A1Q07092 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC20.42■□□□□ 0.86
COL16A1Q07092 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC20.42■□□□□ 0.86
COL16A1Q07092 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL16A1Q07092 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
COL16A1Q07092 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
COL16A1Q07092 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL16A1Q07092 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.42■□□□□ 0.86
COL16A1Q07092 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC20.42■□□□□ 0.86
COL16A1Q07092 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
COL16A1Q07092 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL16A1Q07092 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL16A1Q07092 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL16A1Q07092 RNA5SP359-201ENST00000364838 113 ntBASIC20.42■□□□□ 0.86
COL16A1Q07092 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL16A1Q07092 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC20.42■□□□□ 0.86
COL16A1Q07092 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC20.42■□□□□ 0.86
COL16A1Q07092 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC20.42■□□□□ 0.86
COL16A1Q07092 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL16A1Q07092 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL16A1Q07092 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC20.42■□□□□ 0.86
COL16A1Q07092 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.41■□□□□ 0.86
COL16A1Q07092 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC20.41■□□□□ 0.86
COL16A1Q07092 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL16A1Q07092 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL16A1Q07092 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL16A1Q07092 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL16A1Q07092 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL16A1Q07092 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL16A1Q07092 TSPY25P-201ENST00000429463 745 ntBASIC20.41■□□□□ 0.86
COL16A1Q07092 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms