Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CKS1BP61024 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC11.1□□□□□ -0.63
CKS1BP61024 AL590787.1-201ENST00000568856 1315 ntBASIC11.1□□□□□ -0.63
CKS1BP61024 AC005332.1-201ENST00000577698 1310 ntBASIC11.1□□□□□ -0.63
CKS1BP61024 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
CKS1BP61024 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 KRT8P39-201ENST00000396270 1433 ntBASIC11.1□□□□□ -0.63
CKS1BP61024 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
CKS1BP61024 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC11.1□□□□□ -0.63
CKS1BP61024 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
CKS1BP61024 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC11.1□□□□□ -0.63
CKS1BP61024 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
CKS1BP61024 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
CKS1BP61024 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC11.1□□□□□ -0.63
CKS1BP61024 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
CKS1BP61024 AC007614.4-201ENST00000564048 1827 ntBASIC11.1□□□□□ -0.63
CKS1BP61024 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC11.1□□□□□ -0.63
CKS1BP61024 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC11.1□□□□□ -0.63
CKS1BP61024 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
CKS1BP61024 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
CKS1BP61024 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
CKS1BP61024 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC11.1□□□□□ -0.63
CKS1BP61024 TPSP2-201ENST00000561760 610 ntBASIC11.1□□□□□ -0.63
CKS1BP61024 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC11.1□□□□□ -0.63
CKS1BP61024 RN7SL850P-201ENST00000579959 291 ntBASIC11.1□□□□□ -0.63
CKS1BP61024 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC11.1□□□□□ -0.63
CKS1BP61024 CYB561-217ENST00000582997 877 ntTSL 5 BASIC11.1□□□□□ -0.63
CKS1BP61024 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC11.1□□□□□ -0.63
CKS1BP61024 AP002414.4-201ENST00000589764 1148 ntBASIC11.1□□□□□ -0.63
CKS1BP61024 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC11.1□□□□□ -0.63
CKS1BP61024 AC092329.2-201ENST00000598402 547 ntBASIC11.1□□□□□ -0.63
CKS1BP61024 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC11.1□□□□□ -0.63
CKS1BP61024 AC073592.4-201ENST00000623827 446 ntBASIC11.1□□□□□ -0.63
CKS1BP61024 AP001350.2-201ENST00000625104 1094 ntBASIC11.1□□□□□ -0.63
CKS1BP61024 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC11.1□□□□□ -0.63
CKS1BP61024 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
CKS1BP61024 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
CKS1BP61024 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 PCGF3-213ENST00000620529 1899 ntBASIC11.1□□□□□ -0.63
CKS1BP61024 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
CKS1BP61024 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 AC106818.1-201ENST00000623223 3242 ntBASIC11.1□□□□□ -0.63
CKS1BP61024 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC11.1□□□□□ -0.63
CKS1BP61024 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 AC015909.5-201ENST00000624336 2266 ntBASIC11.1□□□□□ -0.63
CKS1BP61024 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
CKS1BP61024 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC11.1□□□□□ -0.63
CKS1BP61024 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS1BP61024 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CKS1BP61024 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC11.09□□□□□ -0.63
CKS1BP61024 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CKS1BP61024 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
CKS1BP61024 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CKS1BP61024 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CKS1BP61024 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CKS1BP61024 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
CKS1BP61024 MECR-202ENST00000373791 2416 ntTSL 2 BASIC11.09□□□□□ -0.63
CKS1BP61024 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
CKS1BP61024 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CKS1BP61024 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
CKS1BP61024 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC11.09□□□□□ -0.63
CKS1BP61024 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms