Protein–RNA interactions for Protein: P57682

KLF3, Krueppel-like factor 3, humanhuman

Predicted RBP Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3P57682 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
KLF3P57682 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KLF3P57682 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
KLF3P57682 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.5□□□□□ -0.25
KLF3P57682 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
KLF3P57682 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.5□□□□□ -0.25
KLF3P57682 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
KLF3P57682 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
KLF3P57682 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.5□□□□□ -0.25
KLF3P57682 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
KLF3P57682 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
KLF3P57682 AL353779.1-201ENST00000434793 351 ntBASIC13.5□□□□□ -0.25
KLF3P57682 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.5□□□□□ -0.25
KLF3P57682 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.5□□□□□ -0.25
KLF3P57682 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.5□□□□□ -0.25
KLF3P57682 MIR4313-201ENST00000580760 101 ntBASIC13.5□□□□□ -0.25
KLF3P57682 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.5□□□□□ -0.25
KLF3P57682 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.5□□□□□ -0.25
KLF3P57682 AC027307.3-201ENST00000594262 1100 ntBASIC13.5□□□□□ -0.25
KLF3P57682 AF228730.6-201ENST00000641497 218 ntBASIC13.5□□□□□ -0.25
KLF3P57682 AC084121.3-201ENST00000641716 218 ntBASIC13.5□□□□□ -0.25
KLF3P57682 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
KLF3P57682 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.5□□□□□ -0.25
KLF3P57682 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.5□□□□□ -0.25
KLF3P57682 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.5□□□□□ -0.25
KLF3P57682 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KLF3P57682 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLF3P57682 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.49□□□□□ -0.25
KLF3P57682 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
KLF3P57682 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.49□□□□□ -0.25
KLF3P57682 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.49□□□□□ -0.25
KLF3P57682 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
KLF3P57682 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLF3P57682 PRAL-201ENST00000624952 3286 ntBASIC13.49□□□□□ -0.25
KLF3P57682 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLF3P57682 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KLF3P57682 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.49□□□□□ -0.25
KLF3P57682 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.49□□□□□ -0.25
KLF3P57682 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KLF3P57682 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
KLF3P57682 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLF3P57682 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLF3P57682 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KLF3P57682 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLF3P57682 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
KLF3P57682 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLF3P57682 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.49□□□□□ -0.25
KLF3P57682 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLF3P57682 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLF3P57682 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLF3P57682 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLF3P57682 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLF3P57682 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.49□□□□□ -0.25
KLF3P57682 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.49□□□□□ -0.25
KLF3P57682 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.49□□□□□ -0.25
KLF3P57682 AL589987.1-201ENST00000453380 819 ntBASIC13.49□□□□□ -0.25
KLF3P57682 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.49□□□□□ -0.25
KLF3P57682 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.49□□□□□ -0.25
KLF3P57682 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.49□□□□□ -0.25
KLF3P57682 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.49□□□□□ -0.25
KLF3P57682 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.49□□□□□ -0.25
KLF3P57682 AC190387.1-201ENST00000551683 408 ntBASIC13.49□□□□□ -0.25
KLF3P57682 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.49□□□□□ -0.25
KLF3P57682 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.49□□□□□ -0.25
KLF3P57682 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.49□□□□□ -0.25
KLF3P57682 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLF3P57682 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.49□□□□□ -0.25
KLF3P57682 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.49□□□□□ -0.25
KLF3P57682 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
KLF3P57682 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLF3P57682 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
KLF3P57682 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLF3P57682 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KLF3P57682 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms