Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ATP1B3P54709 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATP1B3P54709 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ATP1B3P54709 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.69□□□□□ -0.22
ATP1B3P54709 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATP1B3P54709 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATP1B3P54709 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.69□□□□□ -0.22
ATP1B3P54709 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATP1B3P54709 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATP1B3P54709 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ATP1B3P54709 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.68□□□□□ -0.22
ATP1B3P54709 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ATP1B3P54709 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ATP1B3P54709 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ATP1B3P54709 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ATP1B3P54709 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATP1B3P54709 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATP1B3P54709 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ATP1B3P54709 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATP1B3P54709 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ATP1B3P54709 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATP1B3P54709 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
ATP1B3P54709 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
ATP1B3P54709 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATP1B3P54709 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATP1B3P54709 MIR940-201ENST00000401276 94 ntBASIC13.68□□□□□ -0.22
ATP1B3P54709 ACTG1P14-201ENST00000446382 1122 ntBASIC13.68□□□□□ -0.22
ATP1B3P54709 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.68□□□□□ -0.22
ATP1B3P54709 AL139010.1-201ENST00000454878 894 ntBASIC13.68□□□□□ -0.22
ATP1B3P54709 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ATP1B3P54709 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.68□□□□□ -0.22
ATP1B3P54709 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.68□□□□□ -0.22
ATP1B3P54709 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.68□□□□□ -0.22
ATP1B3P54709 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.68□□□□□ -0.22
ATP1B3P54709 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.68□□□□□ -0.22
ATP1B3P54709 AC026979.3-201ENST00000607315 403 ntBASIC13.68□□□□□ -0.22
ATP1B3P54709 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.68□□□□□ -0.22
ATP1B3P54709 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
ATP1B3P54709 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATP1B3P54709 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.68□□□□□ -0.22
ATP1B3P54709 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.68□□□□□ -0.22
ATP1B3P54709 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.68□□□□□ -0.22
ATP1B3P54709 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATP1B3P54709 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ATP1B3P54709 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ATP1B3P54709 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
ATP1B3P54709 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATP1B3P54709 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.68□□□□□ -0.22
ATP1B3P54709 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ATP1B3P54709 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.68□□□□□ -0.22
ATP1B3P54709 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.68□□□□□ -0.22
ATP1B3P54709 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ATP1B3P54709 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.68□□□□□ -0.22
ATP1B3P54709 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.68□□□□□ -0.22
ATP1B3P54709 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ATP1B3P54709 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
ATP1B3P54709 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATP1B3P54709 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
ATP1B3P54709 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.67□□□□□ -0.22
ATP1B3P54709 REXO1L1P-202ENST00000608646 1974 ntBASIC13.67□□□□□ -0.22
ATP1B3P54709 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.67□□□□□ -0.22
ATP1B3P54709 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATP1B3P54709 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.67□□□□□ -0.22
ATP1B3P54709 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.67□□□□□ -0.22
ATP1B3P54709 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATP1B3P54709 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATP1B3P54709 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.67□□□□□ -0.22
ATP1B3P54709 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATP1B3P54709 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATP1B3P54709 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATP1B3P54709 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ATP1B3P54709 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATP1B3P54709 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATP1B3P54709 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATP1B3P54709 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATP1B3P54709 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATP1B3P54709 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.67□□□□□ -0.22
ATP1B3P54709 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATP1B3P54709 MCCD1P2-201ENST00000423228 335 ntBASIC13.67□□□□□ -0.22
ATP1B3P54709 RPS8P6-201ENST00000426177 609 ntBASIC13.67□□□□□ -0.22
ATP1B3P54709 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ATP1B3P54709 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.67□□□□□ -0.22
ATP1B3P54709 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.67□□□□□ -0.22
ATP1B3P54709 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.67□□□□□ -0.22
ATP1B3P54709 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.67□□□□□ -0.22
ATP1B3P54709 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.67□□□□□ -0.22
ATP1B3P54709 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.67□□□□□ -0.22
ATP1B3P54709 AC243562.1-201ENST00000560672 389 ntBASIC13.67□□□□□ -0.22
ATP1B3P54709 AP000842.3-202ENST00000569238 1080 ntBASIC13.67□□□□□ -0.22
ATP1B3P54709 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.67□□□□□ -0.22
ATP1B3P54709 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.67□□□□□ -0.22
ATP1B3P54709 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.67□□□□□ -0.22
ATP1B3P54709 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATP1B3P54709 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.67□□□□□ -0.22
ATP1B3P54709 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.67□□□□□ -0.22
ATP1B3P54709 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.67□□□□□ -0.22
ATP1B3P54709 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
ATP1B3P54709 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATP1B3P54709 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.67□□□□□ -0.22
ATP1B3P54709 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms