Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NKX2-5P52952 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NKX2-5P52952 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX2-5P52952 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX2-5P52952 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.35□□□□□ -0.27
NKX2-5P52952 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
NKX2-5P52952 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.35□□□□□ -0.27
NKX2-5P52952 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
NKX2-5P52952 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX2-5P52952 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX2-5P52952 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX2-5P52952 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NKX2-5P52952 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX2-5P52952 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX2-5P52952 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.35□□□□□ -0.27
NKX2-5P52952 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX2-5P52952 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NKX2-5P52952 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NKX2-5P52952 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NKX2-5P52952 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX2-5P52952 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NKX2-5P52952 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NKX2-5P52952 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NKX2-5P52952 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-5P52952 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-5P52952 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-5P52952 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.34□□□□□ -0.27
NKX2-5P52952 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-5P52952 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC13.34□□□□□ -0.27
NKX2-5P52952 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-5P52952 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-5P52952 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-5P52952 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-5P52952 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-5P52952 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-5P52952 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-5P52952 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-5P52952 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-5P52952 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-5P52952 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.34□□□□□ -0.27
NKX2-5P52952 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NKX2-5P52952 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.34□□□□□ -0.27
NKX2-5P52952 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.34□□□□□ -0.27
NKX2-5P52952 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
NKX2-5P52952 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.34□□□□□ -0.27
NKX2-5P52952 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.34□□□□□ -0.27
NKX2-5P52952 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
NKX2-5P52952 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-5P52952 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NKX2-5P52952 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NKX2-5P52952 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-5P52952 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
NKX2-5P52952 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.34□□□□□ -0.27
NKX2-5P52952 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NKX2-5P52952 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
NKX2-5P52952 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NKX2-5P52952 AC073548.1-201ENST00000624088 1882 ntBASIC13.33□□□□□ -0.27
NKX2-5P52952 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC13.33□□□□□ -0.27
NKX2-5P52952 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NKX2-5P52952 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NKX2-5P52952 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NKX2-5P52952 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
NKX2-5P52952 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.33□□□□□ -0.27
NKX2-5P52952 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.33□□□□□ -0.27
NKX2-5P52952 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-5P52952 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-5P52952 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.33□□□□□ -0.28
NKX2-5P52952 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-5P52952 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-5P52952 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-5P52952 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
NKX2-5P52952 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-5P52952 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
NKX2-5P52952 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.33□□□□□ -0.28
NKX2-5P52952 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.33□□□□□ -0.28
NKX2-5P52952 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-5P52952 AC005332.3-201ENST00000589904 676 ntBASIC13.33□□□□□ -0.28
NKX2-5P52952 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
NKX2-5P52952 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.33□□□□□ -0.28
NKX2-5P52952 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-5P52952 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-5P52952 AC127383.1-201ENST00000444697 1800 ntBASIC13.33□□□□□ -0.28
NKX2-5P52952 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.33□□□□□ -0.28
NKX2-5P52952 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-5P52952 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-5P52952 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-5P52952 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
NKX2-5P52952 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-5P52952 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-5P52952 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.33□□□□□ -0.28
NKX2-5P52952 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-5P52952 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NKX2-5P52952 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.33□□□□□ -0.28
NKX2-5P52952 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
NKX2-5P52952 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
NKX2-5P52952 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
NKX2-5P52952 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-5P52952 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX2-5P52952 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
NKX2-5P52952 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms