Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CLCN1P35523 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN1P35523 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN1P35523 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.91■□□□□ 0.46
CLCN1P35523 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN1P35523 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CLCN1P35523 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN1P35523 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN1P35523 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CLCN1P35523 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN1P35523 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC17.91■□□□□ 0.46
CLCN1P35523 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CLCN1P35523 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN1P35523 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN1P35523 UNC93B6-202ENST00000528242 690 ntBASIC17.91■□□□□ 0.46
CLCN1P35523 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CLCN1P35523 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.91■□□□□ 0.46
CLCN1P35523 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CLCN1P35523 ACTL9-202ENST00000612068 1252 ntBASIC17.91■□□□□ 0.46
CLCN1P35523 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.91■□□□□ 0.46
CLCN1P35523 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CLCN1P35523 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC17.91■□□□□ 0.46
CLCN1P35523 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CLCN1P35523 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC17.91■□□□□ 0.46
CLCN1P35523 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC17.91■□□□□ 0.46
CLCN1P35523 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.91■□□□□ 0.46
CLCN1P35523 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN1P35523 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN1P35523 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.91■□□□□ 0.46
CLCN1P35523 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLCN1P35523 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.91■□□□□ 0.46
CLCN1P35523 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.91■□□□□ 0.46
CLCN1P35523 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN1P35523 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CLCN1P35523 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN1P35523 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN1P35523 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC17.9■□□□□ 0.46
CLCN1P35523 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN1P35523 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN1P35523 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN1P35523 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN1P35523 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN1P35523 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN1P35523 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN1P35523 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
CLCN1P35523 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.9■□□□□ 0.46
CLCN1P35523 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN1P35523 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.9■□□□□ 0.46
CLCN1P35523 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN1P35523 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN1P35523 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.9■□□□□ 0.46
CLCN1P35523 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN1P35523 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.9■□□□□ 0.46
CLCN1P35523 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CLCN1P35523 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CLCN1P35523 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN1P35523 FAM185BP-201ENST00000443595 716 ntBASIC17.9■□□□□ 0.46
CLCN1P35523 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CLCN1P35523 AC108751.1-201ENST00000490852 363 ntBASIC17.9■□□□□ 0.46
CLCN1P35523 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.9■□□□□ 0.46
CLCN1P35523 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CLCN1P35523 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.9■□□□□ 0.46
CLCN1P35523 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.9■□□□□ 0.46
CLCN1P35523 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN1P35523 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.9■□□□□ 0.46
CLCN1P35523 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.9■□□□□ 0.46
CLCN1P35523 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN1P35523 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CLCN1P35523 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CLCN1P35523 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CLCN1P35523 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CLCN1P35523 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN1P35523 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.9■□□□□ 0.46
CLCN1P35523 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.9■□□□□ 0.46
CLCN1P35523 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN1P35523 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.9■□□□□ 0.46
CLCN1P35523 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN1P35523 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN1P35523 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN1P35523 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CLCN1P35523 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CLCN1P35523 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CLCN1P35523 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.89■□□□□ 0.46
CLCN1P35523 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.89■□□□□ 0.46
CLCN1P35523 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.89■□□□□ 0.45
CLCN1P35523 AC011474.4-201ENST00000623523 2076 ntBASIC17.89■□□□□ 0.45
CLCN1P35523 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CLCN1P35523 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN1P35523 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CLCN1P35523 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN1P35523 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.89■□□□□ 0.45
CLCN1P35523 PRSS29P-201ENST00000440800 595 ntBASIC17.89■□□□□ 0.45
CLCN1P35523 AC009947.1-201ENST00000444350 727 ntBASIC17.89■□□□□ 0.45
CLCN1P35523 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN1P35523 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.89■□□□□ 0.45
CLCN1P35523 AL662844.1-201ENST00000546340 181 ntBASIC17.89■□□□□ 0.45
CLCN1P35523 AC087641.1-201ENST00000557561 1021 ntBASIC17.89■□□□□ 0.45
CLCN1P35523 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.89■□□□□ 0.45
CLCN1P35523 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN1P35523 INVS-201ENST00000262456 2968 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms