Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.97□□□□□ -0.17
HOXC12P31275 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.97□□□□□ -0.17
HOXC12P31275 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXC12P31275 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXC12P31275 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.97□□□□□ -0.17
HOXC12P31275 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
HOXC12P31275 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXC12P31275 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
HOXC12P31275 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HOXC12P31275 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXC12P31275 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.97□□□□□ -0.17
HOXC12P31275 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXC12P31275 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXC12P31275 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXC12P31275 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXC12P31275 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXC12P31275 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXC12P31275 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HOXC12P31275 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.97□□□□□ -0.17
HOXC12P31275 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.97□□□□□ -0.17
HOXC12P31275 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HOXC12P31275 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXC12P31275 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HOXC12P31275 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HOXC12P31275 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXC12P31275 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.96□□□□□ -0.17
HOXC12P31275 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.96□□□□□ -0.17
HOXC12P31275 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HOXC12P31275 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
HOXC12P31275 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HOXC12P31275 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.96□□□□□ -0.17
HOXC12P31275 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HOXC12P31275 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXC12P31275 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.96□□□□□ -0.17
HOXC12P31275 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.96□□□□□ -0.17
HOXC12P31275 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXC12P31275 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
HOXC12P31275 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXC12P31275 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXC12P31275 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXC12P31275 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
HOXC12P31275 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXC12P31275 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXC12P31275 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXC12P31275 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.96□□□□□ -0.17
HOXC12P31275 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HOXC12P31275 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
HOXC12P31275 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.96□□□□□ -0.17
HOXC12P31275 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.96□□□□□ -0.17
HOXC12P31275 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.96□□□□□ -0.17
HOXC12P31275 MIR658-201ENST00000385210 100 ntBASIC13.96□□□□□ -0.17
HOXC12P31275 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HOXC12P31275 AC112492.5-201ENST00000421897 457 ntBASIC13.96□□□□□ -0.17
HOXC12P31275 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.96□□□□□ -0.17
HOXC12P31275 KRT17P8-201ENST00000540749 863 ntBASIC13.96□□□□□ -0.17
HOXC12P31275 TIMM17BP1-201ENST00000545713 516 ntBASIC13.96□□□□□ -0.17
HOXC12P31275 AL512361.1-201ENST00000554200 418 ntBASIC13.96□□□□□ -0.17
HOXC12P31275 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.96□□□□□ -0.17
HOXC12P31275 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.96□□□□□ -0.17
HOXC12P31275 AL450472.2-201ENST00000603663 1156 ntBASIC13.96□□□□□ -0.17
HOXC12P31275 AC074044.1-201ENST00000609673 707 ntBASIC13.96□□□□□ -0.17
HOXC12P31275 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXC12P31275 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.96□□□□□ -0.17
HOXC12P31275 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXC12P31275 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXC12P31275 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXC12P31275 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HOXC12P31275 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
HOXC12P31275 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.96□□□□□ -0.18
HOXC12P31275 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.96□□□□□ -0.18
HOXC12P31275 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
HOXC12P31275 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HOXC12P31275 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HOXC12P31275 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
HOXC12P31275 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HOXC12P31275 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HOXC12P31275 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HOXC12P31275 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.18
HOXC12P31275 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HOXC12P31275 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.95□□□□□ -0.18
HOXC12P31275 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXC12P31275 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
HOXC12P31275 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
HOXC12P31275 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HOXC12P31275 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.95□□□□□ -0.18
HOXC12P31275 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXC12P31275 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXC12P31275 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXC12P31275 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXC12P31275 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.95□□□□□ -0.18
HOXC12P31275 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HOXC12P31275 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXC12P31275 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXC12P31275 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXC12P31275 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXC12P31275 REXO1L1P-202ENST00000608646 1974 ntBASIC13.95□□□□□ -0.18
HOXC12P31275 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HOXC12P31275 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXC12P31275 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HOXC12P31275 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms