Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDC27P30260 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.15■□□□□ 0.5
CDC27P30260 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDC27P30260 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDC27P30260 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC27P30260 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC27P30260 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDC27P30260 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CDC27P30260 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC27P30260 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC27P30260 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.14■□□□□ 0.49
CDC27P30260 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
CDC27P30260 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDC27P30260 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC27P30260 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.14■□□□□ 0.49
CDC27P30260 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CDC27P30260 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDC27P30260 AC236430.1-201ENST00000402231 743 ntBASIC18.14■□□□□ 0.49
CDC27P30260 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.14■□□□□ 0.49
CDC27P30260 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDC27P30260 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.14■□□□□ 0.49
CDC27P30260 TPRX2P-201ENST00000535362 881 ntBASIC18.14■□□□□ 0.49
CDC27P30260 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
CDC27P30260 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC27P30260 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CDC27P30260 AC011467.4-201ENST00000594891 528 ntBASIC18.14■□□□□ 0.49
CDC27P30260 LINC02560-201ENST00000596379 459 ntBASIC18.14■□□□□ 0.49
CDC27P30260 AC025181.2-201ENST00000606994 802 ntBASIC18.14■□□□□ 0.49
CDC27P30260 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.14■□□□□ 0.49
CDC27P30260 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDC27P30260 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.14■□□□□ 0.49
CDC27P30260 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDC27P30260 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CDC27P30260 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
CDC27P30260 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC27P30260 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC27P30260 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDC27P30260 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC27P30260 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
CDC27P30260 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC27P30260 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC27P30260 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC27P30260 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC27P30260 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC27P30260 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC27P30260 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDC27P30260 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC27P30260 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC27P30260 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC27P30260 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDC27P30260 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDC27P30260 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.13■□□□□ 0.49
CDC27P30260 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.13■□□□□ 0.49
CDC27P30260 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.13■□□□□ 0.49
CDC27P30260 AC002472.2-201ENST00000442739 958 ntBASIC18.13■□□□□ 0.49
CDC27P30260 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.13■□□□□ 0.49
CDC27P30260 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC27P30260 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.13■□□□□ 0.49
CDC27P30260 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.13■□□□□ 0.49
CDC27P30260 RARRES2P5-201ENST00000564013 466 ntBASIC18.13■□□□□ 0.49
CDC27P30260 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.13■□□□□ 0.49
CDC27P30260 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CDC27P30260 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDC27P30260 AC023024.2-201ENST00000623561 1993 ntBASIC18.13■□□□□ 0.49
CDC27P30260 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDC27P30260 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CDC27P30260 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC27P30260 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC27P30260 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC27P30260 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDC27P30260 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDC27P30260 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.13■□□□□ 0.49
CDC27P30260 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CDC27P30260 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDC27P30260 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC27P30260 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC27P30260 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CDC27P30260 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC27P30260 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDC27P30260 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC27P30260 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CDC27P30260 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
CDC27P30260 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDC27P30260 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC27P30260 AC023157.3-201ENST00000619086 2088 ntBASIC18.12■□□□□ 0.49
CDC27P30260 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.12■□□□□ 0.49
CDC27P30260 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.12■□□□□ 0.49
CDC27P30260 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.12■□□□□ 0.49
CDC27P30260 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.12■□□□□ 0.49
CDC27P30260 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDC27P30260 AC009118.2-201ENST00000613275 655 ntBASIC18.12■□□□□ 0.49
CDC27P30260 MIR8072-201ENST00000614241 80 ntBASIC18.12■□□□□ 0.49
CDC27P30260 AC008761.3-201ENST00000624803 892 ntBASIC18.12■□□□□ 0.49
CDC27P30260 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC27P30260 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC27P30260 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.12■□□□□ 0.49
CDC27P30260 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC27P30260 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC27P30260 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC27P30260 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms