Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN6P29350 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN6P29350 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PTPN6P29350 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PTPN6P29350 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PTPN6P29350 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.9□□□□□ -0.02
PTPN6P29350 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN6P29350 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN6P29350 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN6P29350 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN6P29350 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN6P29350 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN6P29350 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.9□□□□□ -0.02
PTPN6P29350 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.9□□□□□ -0.02
PTPN6P29350 SPDYE7P-202ENST00000420373 878 ntBASIC14.9□□□□□ -0.02
PTPN6P29350 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.9□□□□□ -0.02
PTPN6P29350 CNN2P2-201ENST00000443536 909 ntBASIC14.9□□□□□ -0.02
PTPN6P29350 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.9□□□□□ -0.02
PTPN6P29350 CNN2P3-201ENST00000450201 906 ntBASIC14.9□□□□□ -0.02
PTPN6P29350 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.9□□□□□ -0.02
PTPN6P29350 CYMP-203ENST00000474680 1263 ntBASIC14.9□□□□□ -0.02
PTPN6P29350 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.9□□□□□ -0.02
PTPN6P29350 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.9□□□□□ -0.02
PTPN6P29350 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.9□□□□□ -0.02
PTPN6P29350 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.9□□□□□ -0.02
PTPN6P29350 AC106028.4-201ENST00000614509 607 ntBASIC14.9□□□□□ -0.02
PTPN6P29350 AL136317.3-201ENST00000618497 906 ntBASIC14.9□□□□□ -0.02
PTPN6P29350 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN6P29350 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.9□□□□□ -0.02
PTPN6P29350 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.9□□□□□ -0.02
PTPN6P29350 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PTPN6P29350 AC023908.3-201ENST00000564211 3047 ntBASIC14.9□□□□□ -0.02
PTPN6P29350 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN6P29350 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN6P29350 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.9□□□□□ -0.02
PTPN6P29350 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PTPN6P29350 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN6P29350 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN6P29350 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN6P29350 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN6P29350 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN6P29350 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.9□□□□□ -0.02
PTPN6P29350 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PTPN6P29350 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PTPN6P29350 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PTPN6P29350 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.9□□□□□ -0.02
PTPN6P29350 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN6P29350 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTPN6P29350 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PTPN6P29350 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PTPN6P29350 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.89□□□□□ -0.03
PTPN6P29350 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
PTPN6P29350 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.89□□□□□ -0.03
PTPN6P29350 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PTPN6P29350 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.89□□□□□ -0.03
PTPN6P29350 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PTPN6P29350 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 AZGP1P1-201ENST00000411909 902 ntBASIC14.89□□□□□ -0.03
PTPN6P29350 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PTPN6P29350 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.89□□□□□ -0.03
PTPN6P29350 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 FAM86GP-201ENST00000448322 971 ntBASIC14.89□□□□□ -0.03
PTPN6P29350 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.89□□□□□ -0.03
PTPN6P29350 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
PTPN6P29350 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 MIR6080-201ENST00000617359 66 ntBASIC14.89□□□□□ -0.03
PTPN6P29350 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.89□□□□□ -0.03
PTPN6P29350 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
PTPN6P29350 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.89□□□□□ -0.03
PTPN6P29350 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PTPN6P29350 AL607033.1-201ENST00000623900 1599 ntBASIC14.89□□□□□ -0.03
PTPN6P29350 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.89□□□□□ -0.03
PTPN6P29350 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTPN6P29350 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms