Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.11□□□□□ -0.47
RAB4AP20338 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.11□□□□□ -0.47
RAB4AP20338 AL512652.2-201ENST00000625156 1716 ntBASIC12.11□□□□□ -0.47
RAB4AP20338 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
RAB4AP20338 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC12.11□□□□□ -0.47
RAB4AP20338 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
RAB4AP20338 PPT1-213ENST00000641319 2388 ntBASIC12.11□□□□□ -0.47
RAB4AP20338 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.11□□□□□ -0.47
RAB4AP20338 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 HBZP1-201ENST00000354915 429 ntBASIC12.11□□□□□ -0.47
RAB4AP20338 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC12.11□□□□□ -0.47
RAB4AP20338 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
RAB4AP20338 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC12.11□□□□□ -0.47
RAB4AP20338 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC12.11□□□□□ -0.47
RAB4AP20338 TSPY15P-201ENST00000457163 923 ntBASIC12.11□□□□□ -0.47
RAB4AP20338 SNORA78-201ENST00000459373 127 ntBASIC12.11□□□□□ -0.47
RAB4AP20338 POU5F1P6-201ENST00000466990 990 ntBASIC12.11□□□□□ -0.47
RAB4AP20338 SNX5-210ENST00000481323 562 ntTSL 3 BASIC12.11□□□□□ -0.47
RAB4AP20338 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC12.11□□□□□ -0.47
RAB4AP20338 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC12.11□□□□□ -0.47
RAB4AP20338 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC12.11□□□□□ -0.47
RAB4AP20338 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC12.11□□□□□ -0.47
RAB4AP20338 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
RAB4AP20338 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
RAB4AP20338 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.11□□□□□ -0.47
RAB4AP20338 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
RAB4AP20338 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.11□□□□□ -0.47
RAB4AP20338 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.11□□□□□ -0.47
RAB4AP20338 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.11□□□□□ -0.47
RAB4AP20338 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 AR-208ENST00000612452 10676 ntTSL 5 BASIC12.11□□□□□ -0.47
RAB4AP20338 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.11□□□□□ -0.47
RAB4AP20338 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
RAB4AP20338 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.11□□□□□ -0.47
RAB4AP20338 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 AC136759.1-202ENST00000530858 2194 ntBASIC12.11□□□□□ -0.47
RAB4AP20338 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.1□□□□□ -0.47
RAB4AP20338 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 AL031731.1-201ENST00000642131 2094 ntBASIC12.1□□□□□ -0.47
RAB4AP20338 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.1□□□□□ -0.47
RAB4AP20338 SNX33P1-201ENST00000592116 1762 ntBASIC12.1□□□□□ -0.47
RAB4AP20338 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.1□□□□□ -0.47
RAB4AP20338 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 AC134407.3-201ENST00000624035 2139 ntBASIC12.1□□□□□ -0.47
RAB4AP20338 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.1□□□□□ -0.47
RAB4AP20338 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
RAB4AP20338 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.1□□□□□ -0.47
RAB4AP20338 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.1□□□□□ -0.47
RAB4AP20338 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
RAB4AP20338 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.1□□□□□ -0.47
RAB4AP20338 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.1□□□□□ -0.47
RAB4AP20338 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
RAB4AP20338 SLC25A3P1-201ENST00000443844 931 ntBASIC12.1□□□□□ -0.47
RAB4AP20338 NUS1P1-201ENST00000446295 882 ntBASIC12.1□□□□□ -0.47
RAB4AP20338 MEG3-211ENST00000452514 461 ntTSL 3 BASIC12.1□□□□□ -0.47
RAB4AP20338 RN7SL606P-201ENST00000472779 293 ntBASIC12.1□□□□□ -0.47
RAB4AP20338 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.1□□□□□ -0.47
RAB4AP20338 P4HB-223ENST00000576390 439 ntTSL 4 BASIC12.1□□□□□ -0.47
RAB4AP20338 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms