Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXD8P13378 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD8P13378 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXD8P13378 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD8P13378 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HOXD8P13378 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD8P13378 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD8P13378 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD8P13378 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD8P13378 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXD8P13378 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD8P13378 AC010491.1-201ENST00000563101 2797 ntBASIC17.05■□□□□ 0.32
HOXD8P13378 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD8P13378 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD8P13378 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXD8P13378 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD8P13378 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HOXD8P13378 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD8P13378 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HOXD8P13378 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
HOXD8P13378 MIR663B-201ENST00000408361 115 ntBASIC17.05■□□□□ 0.32
HOXD8P13378 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
HOXD8P13378 BCYRN1-201ENST00000418539 200 ntBASIC17.05■□□□□ 0.32
HOXD8P13378 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.05■□□□□ 0.32
HOXD8P13378 HLA-K-203ENST00000430151 1046 ntBASIC17.05■□□□□ 0.32
HOXD8P13378 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.05■□□□□ 0.32
HOXD8P13378 HSPB1P2-201ENST00000448722 546 ntBASIC17.05■□□□□ 0.32
HOXD8P13378 AC004898.1-201ENST00000451057 766 ntBASIC17.05■□□□□ 0.32
HOXD8P13378 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.05■□□□□ 0.32
HOXD8P13378 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD8P13378 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXD8P13378 AC022616.1-201ENST00000518688 554 ntBASIC17.05■□□□□ 0.32
HOXD8P13378 AP003171.2-201ENST00000528208 925 ntBASIC17.05■□□□□ 0.32
HOXD8P13378 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXD8P13378 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.05■□□□□ 0.32
HOXD8P13378 DUX4L47-201ENST00000566374 394 ntBASIC17.05■□□□□ 0.32
HOXD8P13378 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXD8P13378 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HOXD8P13378 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.05■□□□□ 0.32
HOXD8P13378 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
HOXD8P13378 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXD8P13378 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXD8P13378 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD8P13378 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD8P13378 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HOXD8P13378 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HOXD8P13378 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD8P13378 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
HOXD8P13378 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD8P13378 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HOXD8P13378 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXD8P13378 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXD8P13378 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD8P13378 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD8P13378 AL354989.2-201ENST00000435838 1540 ntBASIC17.05■□□□□ 0.32
HOXD8P13378 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD8P13378 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HOXD8P13378 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HOXD8P13378 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD8P13378 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXD8P13378 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
HOXD8P13378 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HOXD8P13378 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HOXD8P13378 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD8P13378 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXD8P13378 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD8P13378 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HOXD8P13378 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
HOXD8P13378 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
HOXD8P13378 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HOXD8P13378 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD8P13378 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD8P13378 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HOXD8P13378 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD8P13378 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD8P13378 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.04■□□□□ 0.32
HOXD8P13378 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXD8P13378 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD8P13378 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
HOXD8P13378 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXD8P13378 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD8P13378 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD8P13378 AL096828.3-201ENST00000615354 462 ntBASIC17.04■□□□□ 0.32
HOXD8P13378 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXD8P13378 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD8P13378 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD8P13378 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXD8P13378 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD8P13378 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD8P13378 AL023775.1-201ENST00000454907 1746 ntBASIC17.04■□□□□ 0.32
HOXD8P13378 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD8P13378 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD8P13378 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXD8P13378 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXD8P13378 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXD8P13378 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXD8P13378 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXD8P13378 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXD8P13378 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXD8P13378 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms