Protein–RNA interactions for Protein: P0DP08

IGHV4-38-2, Immunoglobulin heavy variable 4-38-2, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-38-2P0DP08 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
IGHV4-38-2P0DP08 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGHV4-38-2P0DP08 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
IGHV4-38-2P0DP08 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
IGHV4-38-2P0DP08 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGHV4-38-2P0DP08 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGHV4-38-2P0DP08 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
IGHV4-38-2P0DP08 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGHV4-38-2P0DP08 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGHV4-38-2P0DP08 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGHV4-38-2P0DP08 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGHV4-38-2P0DP08 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.61□□□□□ -0.39
IGHV4-38-2P0DP08 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
IGHV4-38-2P0DP08 AL603832.2-201ENST00000566195 2125 ntBASIC12.61□□□□□ -0.39
IGHV4-38-2P0DP08 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGHV4-38-2P0DP08 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
IGHV4-38-2P0DP08 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGHV4-38-2P0DP08 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 CYP2T1P-202ENST00000641596 2535 ntBASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 CSF2RBP1-201ENST00000447905 391 ntBASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 GAPDHP40-201ENST00000505218 1006 ntBASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 PCDHB19P-201ENST00000570871 2371 ntBASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 AL138799.1-201ENST00000448213 1675 ntBASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGHV4-38-2P0DP08 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 WAC-202ENST00000347934 2839 ntTSL 5 BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 FAM86MP-201ENST00000340703 885 ntBASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 ACKR1-201ENST00000368121 1240 ntBASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 AP000812.2-201ENST00000538934 718 ntBASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 GNRHR2-203ENST00000581100 1187 ntBASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms