Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.83□□□□□ -0.2
UBCP0CG48 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UBCP0CG48 LINC01101-201ENST00000622953 1884 ntBASIC13.82□□□□□ -0.2
UBCP0CG48 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBCP0CG48 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBCP0CG48 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.82□□□□□ -0.2
UBCP0CG48 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBCP0CG48 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBCP0CG48 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
UBCP0CG48 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.82□□□□□ -0.2
UBCP0CG48 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBCP0CG48 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
UBCP0CG48 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBCP0CG48 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBCP0CG48 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
UBCP0CG48 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBCP0CG48 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.82□□□□□ -0.2
UBCP0CG48 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBCP0CG48 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.82□□□□□ -0.2
UBCP0CG48 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.82□□□□□ -0.2
UBCP0CG48 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.82□□□□□ -0.2
UBCP0CG48 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBCP0CG48 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBCP0CG48 AC026396.1-201ENST00000419388 421 ntBASIC13.82□□□□□ -0.2
UBCP0CG48 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.82□□□□□ -0.2
UBCP0CG48 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.82□□□□□ -0.2
UBCP0CG48 PHKG1P2-201ENST00000457537 863 ntBASIC13.82□□□□□ -0.2
UBCP0CG48 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.82□□□□□ -0.2
UBCP0CG48 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.82□□□□□ -0.2
UBCP0CG48 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.82□□□□□ -0.2
UBCP0CG48 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.82□□□□□ -0.2
UBCP0CG48 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
UBCP0CG48 AC027601.4-201ENST00000611259 610 ntBASIC13.82□□□□□ -0.2
UBCP0CG48 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.82□□□□□ -0.2
UBCP0CG48 AC092865.6-201ENST00000642101 219 ntBASIC13.82□□□□□ -0.2
UBCP0CG48 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBCP0CG48 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.82□□□□□ -0.2
UBCP0CG48 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBCP0CG48 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBCP0CG48 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.82□□□□□ -0.2
UBCP0CG48 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
UBCP0CG48 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBCP0CG48 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBCP0CG48 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBCP0CG48 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.82□□□□□ -0.2
UBCP0CG48 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.82□□□□□ -0.2
UBCP0CG48 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBCP0CG48 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBCP0CG48 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBCP0CG48 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.82□□□□□ -0.2
UBCP0CG48 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.82□□□□□ -0.2
UBCP0CG48 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.81□□□□□ -0.2
UBCP0CG48 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.81□□□□□ -0.2
UBCP0CG48 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
UBCP0CG48 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBCP0CG48 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBCP0CG48 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
UBCP0CG48 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
UBCP0CG48 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBCP0CG48 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
UBCP0CG48 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.81□□□□□ -0.2
UBCP0CG48 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBCP0CG48 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.81□□□□□ -0.2
UBCP0CG48 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
UBCP0CG48 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBCP0CG48 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBCP0CG48 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.81□□□□□ -0.2
UBCP0CG48 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.81□□□□□ -0.2
UBCP0CG48 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.81□□□□□ -0.2
UBCP0CG48 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.81□□□□□ -0.2
UBCP0CG48 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.81□□□□□ -0.2
UBCP0CG48 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBCP0CG48 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBCP0CG48 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.81□□□□□ -0.2
UBCP0CG48 FAM197Y3-203ENST00000618346 717 ntBASIC13.81□□□□□ -0.2
UBCP0CG48 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBCP0CG48 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.81□□□□□ -0.2
UBCP0CG48 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
UBCP0CG48 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
UBCP0CG48 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBCP0CG48 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
UBCP0CG48 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.81□□□□□ -0.2
UBCP0CG48 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBCP0CG48 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBCP0CG48 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBCP0CG48 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
UBCP0CG48 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBCP0CG48 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
UBCP0CG48 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.81□□□□□ -0.2
UBCP0CG48 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.81□□□□□ -0.2
UBCP0CG48 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBCP0CG48 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.81□□□□□ -0.2
UBCP0CG48 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBCP0CG48 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBCP0CG48 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
UBCP0CG48 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.8□□□□□ -0.2
UBCP0CG48 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.8□□□□□ -0.2
UBCP0CG48 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
UBCP0CG48 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms