Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSF1P09603 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.66□□□□□ -0.22
CSF1P09603 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.66□□□□□ -0.22
CSF1P09603 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSF1P09603 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.66□□□□□ -0.22
CSF1P09603 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CSF1P09603 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CSF1P09603 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CSF1P09603 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSF1P09603 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSF1P09603 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSF1P09603 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CSF1P09603 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.66□□□□□ -0.22
CSF1P09603 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.66□□□□□ -0.22
CSF1P09603 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.66□□□□□ -0.22
CSF1P09603 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
CSF1P09603 SNHG9-202ENST00000564014 471 ntBASIC13.66□□□□□ -0.22
CSF1P09603 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.66□□□□□ -0.22
CSF1P09603 AL596442.2-201ENST00000610240 980 ntBASIC13.66□□□□□ -0.22
CSF1P09603 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
CSF1P09603 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CSF1P09603 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
CSF1P09603 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSF1P09603 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSF1P09603 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSF1P09603 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CSF1P09603 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSF1P09603 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.66□□□□□ -0.22
CSF1P09603 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSF1P09603 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.66□□□□□ -0.22
CSF1P09603 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CSF1P09603 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.66□□□□□ -0.22
CSF1P09603 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSF1P09603 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSF1P09603 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CSF1P09603 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.66□□□□□ -0.22
CSF1P09603 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CSF1P09603 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSF1P09603 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.66□□□□□ -0.22
CSF1P09603 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSF1P09603 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.66□□□□□ -0.22
CSF1P09603 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CSF1P09603 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.66□□□□□ -0.22
CSF1P09603 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.65□□□□□ -0.22
CSF1P09603 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
CSF1P09603 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
CSF1P09603 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CSF1P09603 AC126335.2-201ENST00000623362 4637 ntBASIC13.65□□□□□ -0.22
CSF1P09603 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
CSF1P09603 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.65□□□□□ -0.22
CSF1P09603 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.65□□□□□ -0.22
CSF1P09603 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CSF1P09603 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CSF1P09603 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.65□□□□□ -0.22
CSF1P09603 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.65□□□□□ -0.22
CSF1P09603 PTCHD3P3-201ENST00000403073 906 ntBASIC13.65□□□□□ -0.22
CSF1P09603 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.65□□□□□ -0.22
CSF1P09603 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.65□□□□□ -0.22
CSF1P09603 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.65□□□□□ -0.22
CSF1P09603 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.65□□□□□ -0.22
CSF1P09603 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.65□□□□□ -0.22
CSF1P09603 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.65□□□□□ -0.22
CSF1P09603 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.65□□□□□ -0.22
CSF1P09603 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.65□□□□□ -0.22
CSF1P09603 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.65□□□□□ -0.22
CSF1P09603 AC005829.1-201ENST00000570002 483 ntBASIC13.65□□□□□ -0.22
CSF1P09603 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.65□□□□□ -0.22
CSF1P09603 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.65□□□□□ -0.22
CSF1P09603 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 AC021097.1-201ENST00000607902 574 ntBASIC13.65□□□□□ -0.22
CSF1P09603 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.65□□□□□ -0.22
CSF1P09603 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.65□□□□□ -0.22
CSF1P09603 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.65□□□□□ -0.22
CSF1P09603 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
CSF1P09603 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.65□□□□□ -0.22
CSF1P09603 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CSF1P09603 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.65□□□□□ -0.22
CSF1P09603 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms