Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SLC25A6P4-201ENST00000586535 553 ntBASIC14.88□□□□□ -0.03
MT-ND1P03886 AC007064.4-201ENST00000637740 555 ntBASIC14.88□□□□□ -0.03
MT-ND1P03886 PTENP1-202ENST00000532280 3996 ntBASIC14.88□□□□□ -0.03
MT-ND1P03886 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.88□□□□□ -0.03
MT-ND1P03886 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.88□□□□□ -0.03
MT-ND1P03886 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
MT-ND1P03886 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
MT-ND1P03886 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
MT-ND1P03886 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.88□□□□□ -0.03
MT-ND1P03886 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
MT-ND1P03886 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MT-ND1P03886 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MT-ND1P03886 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
MT-ND1P03886 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MT-ND1P03886 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MT-ND1P03886 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.87□□□□□ -0.03
MT-ND1P03886 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MT-ND1P03886 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
MT-ND1P03886 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.87□□□□□ -0.03
MT-ND1P03886 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
MT-ND1P03886 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MT-ND1P03886 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.87□□□□□ -0.03
MT-ND1P03886 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MT-ND1P03886 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MT-ND1P03886 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
MT-ND1P03886 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MT-ND1P03886 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.87□□□□□ -0.03
MT-ND1P03886 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.87□□□□□ -0.03
MT-ND1P03886 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
MT-ND1P03886 AC079776.4-201ENST00000511039 504 ntBASIC14.87□□□□□ -0.03
MT-ND1P03886 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.87□□□□□ -0.03
MT-ND1P03886 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
MT-ND1P03886 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.87□□□□□ -0.03
MT-ND1P03886 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.87□□□□□ -0.03
MT-ND1P03886 AL009183.1-201ENST00000603760 355 ntBASIC14.87□□□□□ -0.03
MT-ND1P03886 AC023141.13-201ENST00000604991 943 ntBASIC14.87□□□□□ -0.03
MT-ND1P03886 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MT-ND1P03886 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
MT-ND1P03886 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
MT-ND1P03886 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MT-ND1P03886 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MT-ND1P03886 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.87□□□□□ -0.03
MT-ND1P03886 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MT-ND1P03886 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MT-ND1P03886 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MT-ND1P03886 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MT-ND1P03886 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MT-ND1P03886 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MT-ND1P03886 AC079781.5-202ENST00000641784 3743 ntBASIC14.87□□□□□ -0.03
MT-ND1P03886 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MT-ND1P03886 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MT-ND1P03886 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
MT-ND1P03886 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.86□□□□□ -0.03
MT-ND1P03886 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-ND1P03886 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-ND1P03886 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
MT-ND1P03886 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-ND1P03886 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-ND1P03886 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
MT-ND1P03886 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-ND1P03886 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
MT-ND1P03886 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
MT-ND1P03886 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-ND1P03886 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MT-ND1P03886 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
MT-ND1P03886 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-ND1P03886 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MT-ND1P03886 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
MT-ND1P03886 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.86□□□□□ -0.03
MT-ND1P03886 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-ND1P03886 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-ND1P03886 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-ND1P03886 WASH6P-202ENST00000359512 1437 ntBASIC14.86□□□□□ -0.03
MT-ND1P03886 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-ND1P03886 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
MT-ND1P03886 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-ND1P03886 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-ND1P03886 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
MT-ND1P03886 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.86□□□□□ -0.03
MT-ND1P03886 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-ND1P03886 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.86□□□□□ -0.03
MT-ND1P03886 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.86□□□□□ -0.03
MT-ND1P03886 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.86□□□□□ -0.03
MT-ND1P03886 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.86□□□□□ -0.03
MT-ND1P03886 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms