Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A2O43868 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A2O43868 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A2O43868 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC28A2O43868 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A2O43868 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A2O43868 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC28A2O43868 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A2O43868 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A2O43868 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A2O43868 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC28A2O43868 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC28A2O43868 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC28A2O43868 ACTBP11-201ENST00000436287 1126 ntBASIC15.19■□□□□ 0.02
SLC28A2O43868 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A2O43868 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A2O43868 RN7SL837P-201ENST00000463010 287 ntBASIC15.19■□□□□ 0.02
SLC28A2O43868 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SLC28A2O43868 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC28A2O43868 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC28A2O43868 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.19■□□□□ 0.02
SLC28A2O43868 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
SLC28A2O43868 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.19■□□□□ 0.02
SLC28A2O43868 AC004840.1-201ENST00000636359 365 ntBASIC15.19■□□□□ 0.02
SLC28A2O43868 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A2O43868 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SLC28A2O43868 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A2O43868 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A2O43868 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SLC28A2O43868 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC28A2O43868 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A2O43868 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SLC28A2O43868 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A2O43868 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A2O43868 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC28A2O43868 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC28A2O43868 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC28A2O43868 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A2O43868 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A2O43868 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A2O43868 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC28A2O43868 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A2O43868 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A2O43868 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A2O43868 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A2O43868 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A2O43868 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A2O43868 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A2O43868 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A2O43868 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A2O43868 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A2O43868 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A2O43868 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A2O43868 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC28A2O43868 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A2O43868 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A2O43868 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A2O43868 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC28A2O43868 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A2O43868 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A2O43868 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A2O43868 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A2O43868 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SLC28A2O43868 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.18■□□□□ 0.02
SLC28A2O43868 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.18■□□□□ 0.02
SLC28A2O43868 AC119751.2-201ENST00000504529 210 ntBASIC15.18■□□□□ 0.02
SLC28A2O43868 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC28A2O43868 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC28A2O43868 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.18■□□□□ 0.02
SLC28A2O43868 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC28A2O43868 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC28A2O43868 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC28A2O43868 MIR6775-201ENST00000617557 69 ntBASIC15.18■□□□□ 0.02
SLC28A2O43868 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC28A2O43868 AL109936.8-201ENST00000641772 604 ntBASIC15.18■□□□□ 0.02
SLC28A2O43868 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC28A2O43868 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC28A2O43868 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SLC28A2O43868 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A2O43868 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A2O43868 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SLC28A2O43868 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A2O43868 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A2O43868 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A2O43868 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC28A2O43868 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC28A2O43868 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SLC28A2O43868 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC28A2O43868 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SLC28A2O43868 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC28A2O43868 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC28A2O43868 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC28A2O43868 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC28A2O43868 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC28A2O43868 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC28A2O43868 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC28A2O43868 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC28A2O43868 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC28A2O43868 CETN4P-206ENST00000642099 2168 ntBASIC15.17■□□□□ 0.02
SLC28A2O43868 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms