Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLIC1O00299 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLIC1O00299 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CLIC1O00299 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.83□□□□□ -0.04
CLIC1O00299 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.83□□□□□ -0.04
CLIC1O00299 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 AC007292.2-201ENST00000593524 1812 ntBASIC14.83□□□□□ -0.04
CLIC1O00299 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.83□□□□□ -0.04
CLIC1O00299 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.83□□□□□ -0.04
CLIC1O00299 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CLIC1O00299 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.83□□□□□ -0.04
CLIC1O00299 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.83□□□□□ -0.04
CLIC1O00299 AZGP1P1-201ENST00000411909 902 ntBASIC14.83□□□□□ -0.04
CLIC1O00299 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.83□□□□□ -0.04
CLIC1O00299 AC136604.1-201ENST00000418535 575 ntBASIC14.83□□□□□ -0.04
CLIC1O00299 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.83□□□□□ -0.04
CLIC1O00299 TIMM8BP1-201ENST00000452384 211 ntBASIC14.83□□□□□ -0.04
CLIC1O00299 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.83□□□□□ -0.04
CLIC1O00299 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CLIC1O00299 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.83□□□□□ -0.04
CLIC1O00299 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.83□□□□□ -0.04
CLIC1O00299 AC084121.4-201ENST00000641598 221 ntBASIC14.83□□□□□ -0.04
CLIC1O00299 AF228730.8-201ENST00000642140 221 ntBASIC14.83□□□□□ -0.04
CLIC1O00299 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.83□□□□□ -0.04
CLIC1O00299 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CLIC1O00299 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.83□□□□□ -0.04
CLIC1O00299 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLIC1O00299 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLIC1O00299 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLIC1O00299 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLIC1O00299 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.82□□□□□ -0.04
CLIC1O00299 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLIC1O00299 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.82□□□□□ -0.04
CLIC1O00299 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.82□□□□□ -0.04
CLIC1O00299 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CLIC1O00299 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLIC1O00299 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.82□□□□□ -0.04
CLIC1O00299 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLIC1O00299 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLIC1O00299 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLIC1O00299 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLIC1O00299 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CLIC1O00299 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLIC1O00299 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLIC1O00299 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CLIC1O00299 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.82□□□□□ -0.04
CLIC1O00299 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.82□□□□□ -0.04
CLIC1O00299 ACTG1P14-201ENST00000446382 1122 ntBASIC14.82□□□□□ -0.04
CLIC1O00299 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.82□□□□□ -0.04
CLIC1O00299 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLIC1O00299 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.82□□□□□ -0.04
CLIC1O00299 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.82□□□□□ -0.04
CLIC1O00299 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.82□□□□□ -0.04
CLIC1O00299 SLC25A39P2-201ENST00000537614 270 ntBASIC14.82□□□□□ -0.04
CLIC1O00299 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.82□□□□□ -0.04
CLIC1O00299 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLIC1O00299 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLIC1O00299 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLIC1O00299 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.82□□□□□ -0.04
CLIC1O00299 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLIC1O00299 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.82□□□□□ -0.04
CLIC1O00299 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLIC1O00299 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLIC1O00299 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLIC1O00299 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.82□□□□□ -0.04
CLIC1O00299 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLIC1O00299 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLIC1O00299 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.82□□□□□ -0.04
CLIC1O00299 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.81□□□□□ -0.04
CLIC1O00299 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLIC1O00299 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLIC1O00299 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLIC1O00299 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLIC1O00299 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms