Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 AL603764.1-201ENST00000636452 321 ntBASIC20.89■□□□□ 0.93
SBNO1A3KN83 PCDHA14-201ENST00000506751 2298 ntBASIC20.89■□□□□ 0.93
SBNO1A3KN83 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SBNO1A3KN83 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.89■□□□□ 0.93
SBNO1A3KN83 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
SBNO1A3KN83 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SBNO1A3KN83 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SBNO1A3KN83 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.89■□□□□ 0.93
SBNO1A3KN83 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SBNO1A3KN83 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SBNO1A3KN83 GCK-209ENST00000616242 2260 ntTSL 5 BASIC20.89■□□□□ 0.93
SBNO1A3KN83 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SBNO1A3KN83 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.89■□□□□ 0.93
SBNO1A3KN83 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SBNO1A3KN83 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SBNO1A3KN83 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
SBNO1A3KN83 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC20.88■□□□□ 0.93
SBNO1A3KN83 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SBNO1A3KN83 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC20.88■□□□□ 0.93
SBNO1A3KN83 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC20.88■□□□□ 0.93
SBNO1A3KN83 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SBNO1A3KN83 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SBNO1A3KN83 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SBNO1A3KN83 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SBNO1A3KN83 UFM1-202ENST00000379649 846 ntTSL 4 BASIC20.88■□□□□ 0.93
SBNO1A3KN83 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SBNO1A3KN83 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC20.88■□□□□ 0.93
SBNO1A3KN83 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SBNO1A3KN83 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC20.88■□□□□ 0.93
SBNO1A3KN83 Z97180.1-201ENST00000445173 988 ntBASIC20.88■□□□□ 0.93
SBNO1A3KN83 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC20.88■□□□□ 0.93
SBNO1A3KN83 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SBNO1A3KN83 BNIP3P13-201ENST00000599968 566 ntBASIC20.88■□□□□ 0.93
SBNO1A3KN83 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC20.88■□□□□ 0.93
SBNO1A3KN83 AP000346.4-201ENST00000614827 381 ntBASIC20.88■□□□□ 0.93
SBNO1A3KN83 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC20.88■□□□□ 0.93
SBNO1A3KN83 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SBNO1A3KN83 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC20.88■□□□□ 0.93
SBNO1A3KN83 KRT8P4-201ENST00000509735 1454 ntBASIC20.88■□□□□ 0.93
SBNO1A3KN83 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SBNO1A3KN83 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SBNO1A3KN83 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SBNO1A3KN83 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SBNO1A3KN83 HTR7P1-202ENST00000624664 4411 ntBASIC20.88■□□□□ 0.93
SBNO1A3KN83 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SBNO1A3KN83 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SBNO1A3KN83 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SBNO1A3KN83 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
SBNO1A3KN83 AC020916.1-201ENST00000587762 1774 ntBASIC20.87■□□□□ 0.93
SBNO1A3KN83 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SBNO1A3KN83 AL158070.2-201ENST00000623713 1621 ntBASIC20.87■□□□□ 0.93
SBNO1A3KN83 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SBNO1A3KN83 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SBNO1A3KN83 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC20.87■□□□□ 0.93
SBNO1A3KN83 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SBNO1A3KN83 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SBNO1A3KN83 AC004066.1-201ENST00000502488 802 ntBASIC20.87■□□□□ 0.93
SBNO1A3KN83 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC20.87■□□□□ 0.93
SBNO1A3KN83 CFL1-214ENST00000534769 758 ntTSL 2 BASIC20.87■□□□□ 0.93
SBNO1A3KN83 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC20.87■□□□□ 0.93
SBNO1A3KN83 SYT17-208ENST00000568433 812 ntTSL 3 BASIC20.87■□□□□ 0.93
SBNO1A3KN83 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
SBNO1A3KN83 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC20.87■□□□□ 0.93
SBNO1A3KN83 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SBNO1A3KN83 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SBNO1A3KN83 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SBNO1A3KN83 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SBNO1A3KN83 AC022188.1-201ENST00000620960 1664 ntBASIC20.87■□□□□ 0.93
SBNO1A3KN83 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SBNO1A3KN83 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SBNO1A3KN83 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC20.87■□□□□ 0.93
SBNO1A3KN83 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SBNO1A3KN83 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC20.87■□□□□ 0.93
SBNO1A3KN83 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SBNO1A3KN83 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.87■□□□□ 0.93
SBNO1A3KN83 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SBNO1A3KN83 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SBNO1A3KN83 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC20.86■□□□□ 0.93
SBNO1A3KN83 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SBNO1A3KN83 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC20.86■□□□□ 0.93
SBNO1A3KN83 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC20.86■□□□□ 0.93
SBNO1A3KN83 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC20.86■□□□□ 0.93
SBNO1A3KN83 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SBNO1A3KN83 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SBNO1A3KN83 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SBNO1A3KN83 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
SBNO1A3KN83 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC20.86■□□□□ 0.93
SBNO1A3KN83 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC20.86■□□□□ 0.93
SBNO1A3KN83 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SBNO1A3KN83 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SBNO1A3KN83 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SBNO1A3KN83 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SBNO1A3KN83 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SBNO1A3KN83 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SBNO1A3KN83 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SBNO1A3KN83 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.86■□□□□ 0.93
SBNO1A3KN83 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SBNO1A3KN83 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SBNO1A3KN83 AC018695.7-201ENST00000624587 2492 ntBASIC20.86■□□□□ 0.93
SBNO1A3KN83 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms