Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV5A0A0B4J1U4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV5A0A0B4J1U4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV5A0A0B4J1U4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
TRGV5A0A0B4J1U4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV5A0A0B4J1U4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV5A0A0B4J1U4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TRGV5A0A0B4J1U4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.02□□□□□ -0.17
TRGV5A0A0B4J1U4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.02□□□□□ -0.17
TRGV5A0A0B4J1U4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
TRGV5A0A0B4J1U4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRGV5A0A0B4J1U4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 KRT223P-202ENST00000449164 1292 ntBASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 AC093433.1-201ENST00000458048 571 ntBASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 AP001889.1-201ENST00000525414 633 ntBASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 MIR6775-201ENST00000617557 69 ntBASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRGV5A0A0B4J1U4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 PCDHB19P-201ENST00000570871 2371 ntBASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 RPS2P32-201ENST00000439199 892 ntBASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 AC012441.1-201ENST00000446669 685 ntBASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14□□□□□ -0.17
TRGV5A0A0B4J1U4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms