Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 AC015656.1-201ENST00000624209 3578 ntBASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 SAPCD2P3-201ENST00000455031 850 ntBASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 AC105339.3-201ENST00000560043 636 ntBASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 AL009183.1-201ENST00000603760 355 ntBASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 AC008735.5-201ENST00000623544 497 ntBASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 REXO1L1P-202ENST00000608646 1974 ntBASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 BNIP3P1-202ENST00000550043 1585 ntBASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 AKR1C7P-201ENST00000305623 895 ntBASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 AC073648.2-201ENST00000510116 352 ntBASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 AF238378.1-201ENST00000526806 358 ntBASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 AC109635.5-201ENST00000533593 962 ntBASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 AP002414.3-201ENST00000589352 1468 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms