Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHB13Q9Y5F0 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHB13Q9Y5F0 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 AL607033.1-201ENST00000623900 1599 ntBASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 AC092127.1-201ENST00000567093 3455 ntBASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 AC118282.1-201ENST00000506408 765 ntBASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 AL512361.1-201ENST00000554200 418 ntBASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 AC008567.2-201ENST00000589751 656 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 AC112220.4-201ENST00000604982 1263 ntBASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB13Q9Y5F0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 Z97205.2-201ENST00000564697 1639 ntBASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 TARDBPP1-201ENST00000442013 1203 ntBASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 SDHAP3-202ENST00000515467 728 ntBASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 AC010336.2-201ENST00000564226 506 ntBASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 AC025048.3-201ENST00000590609 569 ntBASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 AC005702.4-201ENST00000618393 416 ntBASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 AP000280.1-201ENST00000624800 832 ntBASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB13Q9Y5F0 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms