Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 EDF1-203ENST00000371649 790 ntTSL 2 BASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 AC079776.1-201ENST00000401540 1152 ntBASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 NAA50-208ENST00000497255 789 ntTSL 5 BASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 PTP4A1P2-201ENST00000546033 454 ntBASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 APOC4-201ENST00000591600 348 ntTSL 3 BASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 AC233724.13-201ENST00000598383 410 ntBASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 AL162727.3-201ENST00000635661 2787 ntBASIC20.83■□□□□ 0.92
NPC1L1Q9UHC9 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 TP73-213ENST00000604479 1623 ntTSL 5 BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPC1L1Q9UHC9 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 EIF3FP3-201ENST00000434851 1086 ntBASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
NPC1L1Q9UHC9 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC20.8■□□□□ 0.92
NPC1L1Q9UHC9 AC073347.1-201ENST00000421633 2643 ntBASIC20.8■□□□□ 0.92
NPC1L1Q9UHC9 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NPC1L1Q9UHC9 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC20.8■□□□□ 0.92
NPC1L1Q9UHC9 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPC1L1Q9UHC9 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC20.8■□□□□ 0.92
NPC1L1Q9UHC9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
NPC1L1Q9UHC9 AL138709.1-201ENST00000614840 1693 ntBASIC20.8■□□□□ 0.92
NPC1L1Q9UHC9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms