Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 AC092612.1-201ENST00000514501 998 ntBASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 RN7SL357P-201ENST00000581065 298 ntBASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 MIR2392-201ENST00000584881 84 ntBASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 AC011840.2-201ENST00000563063 1520 ntBASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RIMBP3Q9UFD9 AC006058.4-201ENST00000624016 1670 ntBASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 AL157407.1-201ENST00000435784 904 ntBASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 SCARNA12-201ENST00000459155 270 ntBASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 APOC1-209ENST00000592885 562 ntTSL 3 BASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 AC018629.1-201ENST00000623381 1736 ntBASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC23.97■■□□□ 1.43
RIMBP3Q9UFD9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RIMBP3Q9UFD9 SIGLEC20P-201ENST00000595243 1311 ntBASIC23.96■■□□□ 1.43
RIMBP3Q9UFD9 GCK-202ENST00000345378 2421 ntTSL 2 BASIC23.96■■□□□ 1.43
RIMBP3Q9UFD9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RIMBP3Q9UFD9 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC23.96■■□□□ 1.43
RIMBP3Q9UFD9 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RIMBP3Q9UFD9 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RIMBP3Q9UFD9 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RIMBP3Q9UFD9 SNORA57-201ENST00000383870 149 ntBASIC23.96■■□□□ 1.43
RIMBP3Q9UFD9 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RIMBP3Q9UFD9 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
RIMBP3Q9UFD9 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC23.96■■□□□ 1.43
RIMBP3Q9UFD9 AC092862.1-201ENST00000541534 533 ntBASIC23.96■■□□□ 1.43
RIMBP3Q9UFD9 AC068831.5-201ENST00000557387 328 ntBASIC23.96■■□□□ 1.43
RIMBP3Q9UFD9 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC23.96■■□□□ 1.43
RIMBP3Q9UFD9 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RIMBP3Q9UFD9 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RIMBP3Q9UFD9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC23.96■■□□□ 1.43
RIMBP3Q9UFD9 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
RIMBP3Q9UFD9 AL109809.1-201ENST00000418979 1367 ntBASIC23.96■■□□□ 1.43
RIMBP3Q9UFD9 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RIMBP3Q9UFD9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RIMBP3Q9UFD9 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
RIMBP3Q9UFD9 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC23.96■■□□□ 1.43
RIMBP3Q9UFD9 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RIMBP3Q9UFD9 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
RIMBP3Q9UFD9 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
RIMBP3Q9UFD9 AL121949.3-201ENST00000406684 385 ntBASIC23.95■■□□□ 1.43
RIMBP3Q9UFD9 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC23.95■■□□□ 1.43
RIMBP3Q9UFD9 EEF1DP5-201ENST00000431410 772 ntBASIC23.95■■□□□ 1.43
RIMBP3Q9UFD9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.43
RIMBP3Q9UFD9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC23.95■■□□□ 1.43
RIMBP3Q9UFD9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RIMBP3Q9UFD9 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
RIMBP3Q9UFD9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RIMBP3Q9UFD9 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RIMBP3Q9UFD9 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RIMBP3Q9UFD9 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC23.95■■□□□ 1.42
RIMBP3Q9UFD9 AC098657.1-201ENST00000416270 1135 ntBASIC23.95■■□□□ 1.42
RIMBP3Q9UFD9 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RIMBP3Q9UFD9 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC23.95■■□□□ 1.42
RIMBP3Q9UFD9 AC020922.4-201ENST00000621389 339 ntBASIC23.95■■□□□ 1.42
RIMBP3Q9UFD9 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC23.95■■□□□ 1.42
RIMBP3Q9UFD9 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC23.95■■□□□ 1.42
RIMBP3Q9UFD9 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RIMBP3Q9UFD9 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms