Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 TMEM14DP-201ENST00000422205 345 ntBASIC14.78□□□□□ -0.04
CTSFQ9UBX1 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 KRT18P43-201ENST00000469825 1281 ntBASIC14.78□□□□□ -0.04
CTSFQ9UBX1 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 AL033527.5-201ENST00000641382 801 ntBASIC14.78□□□□□ -0.04
CTSFQ9UBX1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CTSFQ9UBX1 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CTSFQ9UBX1 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.77□□□□□ -0.04
CTSFQ9UBX1 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.77□□□□□ -0.04
CTSFQ9UBX1 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.77□□□□□ -0.04
CTSFQ9UBX1 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CTSFQ9UBX1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.77□□□□□ -0.04
CTSFQ9UBX1 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CTSFQ9UBX1 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
CTSFQ9UBX1 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CTSFQ9UBX1 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CTSFQ9UBX1 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CTSFQ9UBX1 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 AL442647.2-201ENST00000429864 857 ntBASIC14.77□□□□□ -0.05
CTSFQ9UBX1 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.77□□□□□ -0.05
CTSFQ9UBX1 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 BRI3BPP1-201ENST00000594224 787 ntBASIC14.77□□□□□ -0.05
CTSFQ9UBX1 AL049840.4-201ENST00000602422 811 ntBASIC14.77□□□□□ -0.05
CTSFQ9UBX1 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
CTSFQ9UBX1 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CTSFQ9UBX1 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.76□□□□□ -0.05
CTSFQ9UBX1 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
CTSFQ9UBX1 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CTSFQ9UBX1 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CTSFQ9UBX1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTSFQ9UBX1 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
CTSFQ9UBX1 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CTSFQ9UBX1 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.76□□□□□ -0.05
CTSFQ9UBX1 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.76□□□□□ -0.05
CTSFQ9UBX1 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.76□□□□□ -0.05
CTSFQ9UBX1 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.76□□□□□ -0.05
CTSFQ9UBX1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTSFQ9UBX1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTSFQ9UBX1 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTSFQ9UBX1 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTSFQ9UBX1 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.76□□□□□ -0.05
CTSFQ9UBX1 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms