Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 RN7SL399P-201ENST00000471648 279 ntBASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 AC008735.3-201ENST00000596646 500 ntBASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 MIR6799-201ENST00000620297 69 ntBASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
HDAC6Q9UBN7 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 KRT8P37-201ENST00000451609 1420 ntBASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 EEF1DP4-201ENST00000446006 880 ntBASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 AL391069.4-201ENST00000609583 481 ntBASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 AL136379.1-201ENST00000623471 2642 ntBASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HDAC6Q9UBN7 REXO1L8P-201ENST00000604378 1897 ntBASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 AP005117.1-202ENST00000581724 1908 ntBASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 AC119751.2-201ENST00000504529 210 ntBASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 AC243562.2-201ENST00000561247 970 ntBASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms